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ویرایش: [1 ed.] سری: ISBN (شابک) : 9781536195293, 9781536196542 ناشر: Nova Science Publishers, Inc. سال نشر: 2021 تعداد صفحات: [4328] زبان: English فرمت فایل : PDF (درصورت درخواست کاربر به PDF، EPUB یا AZW3 تبدیل می شود) حجم فایل: 76 Mb
در صورت تبدیل فایل کتاب Encyclopedia of Marine Biology (12 Volume Set) [Team-IRA] به فرمت های PDF، EPUB، AZW3، MOBI و یا DJVU می توانید به پشتیبان اطلاع دهید تا فایل مورد نظر را تبدیل نمایند.
توجه داشته باشید کتاب دایره المعارف زیست شناسی دریایی (مجموعه 12 جلدی) [Team-IRA] نسخه زبان اصلی می باشد و کتاب ترجمه شده به فارسی نمی باشد. وبسایت اینترنشنال لایبرری ارائه دهنده کتاب های زبان اصلی می باشد و هیچ گونه کتاب ترجمه شده یا نوشته شده به فارسی را ارائه نمی دهد.
\"این دایره المعارف 12 جلدی شامل 160 فصل است که طیف گسترده ای از موضوعات مرتبط با زیست شناسی دریایی را پوشش می دهد\"--
\"This 12 volume encyclopedia contains 160 chapters covering a broad range of topics related to marine biology\"--
Contents Preface Chapter 1 Functional Morphology in Sea Turtle Skulls Abstract Introduction Basic Terminology Skull in Sea Turtles Feeding Process and Feeding System Feeding Habits of Each Species Green Turtle (Chelonia mydas) Loggerhead (Caretta caretta) Olive Ridley (Lepidochelys olivacea) Hawksbill (Eretmochelys imbricata) Methods Morphological Analysis through Geometric Morphometrics Functional Analysis by Biomechanical Models Example References Chapter 2 Ecotoxicology of Sea Turtles Abstract Introduction Ecotoxicology as a Tool for Conservation of Sea Turtles Analytical Procedures Used in Sea Turtles Ecotoxicology Studies Chemical Determination of Metals: Use of Tissue Residues in Sea Turtle Ecotoxicology Oxidative Stress Biomarkers Reduce Glutathione (GSH) Glutathione S-Transferases (GST) Glutathione Peroxidase (GPx) Superoxide Dismutases (SODs) Catalase (CAT) Protein Carboxylation (PCO) Lipid Peroxidation (LPO) Antioxidant Capacity (ACAP) Micronucleus Assay Organic Pollutants into Sea Turtles Case Study: Chelonia mydas Ecotoxicology in Brazil Prospects for Ecotoxicology of Sea Turtles Acknowledgment References Chapter 3 Sea Turtle Photo-Identification Abstract Introduction Methods Sea Turtle Non-Photographic Identification Methods Sea Turtle Photo-Identification Soft Shelled Sea Turtles Other Sea Turtles Level 1. Database Types of Users User Details Specimen Details Capture Details Level 2. Monitoring System of Cephalic Scale Pattern Level 3. Interface of Use Acknowledgments References Chapter 4 Topological Tools for Evaluating the Structural Importance of Sea Turtles in Trophic Networks Abstract Introduction Methods Topological Approach Building the Trophic Network Node Degree (D) Centrality Indices Keystone Index (KI) (Jordán et al. 2006) The Topological Importance Index (TI) (Jordán et al. 2009) Key Player Problem (KPP) Application of Topological Analysis to Evaluate Ecological Role of Sea Turtles Results of Topological Analysis Conclusion References Chapter 5 Research Techniques in the Study of Marine Turtle Strandings Abstract Introduction Defining a Stranding On the Interest of a Marine Turtle Stranding What to Do When Finding a Marine Turtle Stranded on the Beach? Organizing the Response Methods Stranded Marine Turtle Sampling Techniques Stranding Network Beach Monitoring Integrated Databases Studies Based on Stranded Marine Turtles Scopes and Limitations Data Collection Stranding Location Species Identification Family Dermochelyidae Family Cheloniidae Leatherback Turtle (Dermochelys coriacea) Green Turtle (Chelonia mydas) Flatback Turtle (Natator depressus) Hawksbill Turtle (Eretmochelys imbricata) Loggerhead Turtle (Caretta caretta) Kemp’s Ridley (Lepidochelys kempii) Olive Ridley Turtle (Lepidochelys olivacea) Sex Determination Photography Documentation Tagging State of Decomposition of the Carcasses Morphometrics Sample Collection Live Turtles Dead Turtles Actions on Live Animals, First Aid In Situ External Physical Examination Diagnostic Techniques Examples of Studies Based on Stranded Marine Turtles Parallel Studies That Can be Conducted Associated to Marine Turtle Strandings (in-Water Studies, Aerial Surveys) Conclusion References Annexes Annex I. Example of Stranding Data Forms (Modified from STSN) Annex II. Basic Field Equipment for Stranding Studies Annex III. Equipment for Necropsy in Facilities Annex IV. Example of Necropsy Data Form (Modified from Work 2000) Chapter 6 Genetics and Conservation of Sea Turtles Abstract Introduction Methods Analytical Procedures Used in Sea Turtles Genetic Studies Microsatellite Analysis (Simple Sequence Repeats - SSRs) PCR-RFLP Analysis (Restriction Fragment Length Polymorphisms) SNP (Single Nucleotide Polymorphism) Mitochondrial DNA (mtDNA) Haplotypes DNA Barcodes Next-Generation Sequencing (NGS) Studies Case of Conservation Genetic for Sea Turtles Dermochelys coriacea: Molecular Data and Its Use on Leatherback Turtle’s Conservation Phylogeography and Mixed Stocks at Foraging Grounds Population Dynamics, Demographic Histories and Estimations of Effective Population Size RMU´s and Conservation Priorities Matings Systems and Multiple Paternity Barcodes and PCR-RFLP to Identify Species Eretmochelys imbricata Caretta caretta Brazilian Rookeries Brazilian Foraging Aggregation Additional Reports: Bycatch and Uncommon Nesting Site Brazilian Demography History Global Population Structure and Phylogeography Hybridization Conservation Perspectives for Caretta caretta Perspectives for Genetic and Conservation of Sea Turtles Conclusion References Chapter 7 Practical Manual on Clinical Cytology and Hematology for Sea Turtle Conservation Abstract Introduction Hematology Methodology Blood Collection in the Field Manual Preparation of Blood Samples Counting Cells Manually Hematocrit Determination Determination of Total Leukocytes and Erythrocytes Recording Cell Measurements Evaluation of Cell Morphology Color Reference of Blood Cell Types Using Diff Quick Results Blood Samples as Reference Values Gulf of Venezuela, Alta Guajira (Montilla et al. 2006) The Wildlife Refuge Aves Island, Venezuela Conclusion and Discussion References Chapter 8 Arachidonic Acid is a Major Fatty Acid in Gonads of Coral Reef Fishes and Improves Larval Survival of Rabbitfish Sigunus gutattus Abstract Introduction 1. Wide Distribution of Arachidonic Acid as Major Fatty Acid Component in Coral Reef Associated Fishes 1.1. Coral Reef Associated, Demersal Fishes 1.2. Tropical Pelagic Fishes 1.3. Possible Origin of ArA in Coral Reef 1.4. Rabbitfish 2. Effects of Dietary Arachidonic Acid Supplementation on Reproductive Performance of Rabbitfish Broodstock 2.1. First Trial 2.2. Second Trial 3. Effects of DHA/Arachidonic Acid-Enriched Rotifers on Survival and Growth of Rabbitfish Fry 3.1. Preliminary Studies 3.2. Materials and Methods 3.3. Survival and Growth Conclusion Acknowledgments References Chapter 9 Proteins Responsive to Variable Temperature Exposure in the Reef-Building Coral Seriatopora hystrix Abstract Introduction Materials and Methods SHVTS Protein Extraction 2D Gel Electrophoresis 1st Dimension-Isoelectric Focusing 2D Gel Electrophoresis 2nd Dimension-SDS-PAGE MS MS Data Analysis Western Blotting Results Differentially Expressed Proteins Uncovered by a 2D + MS-Based Approach RBCL Western Blot Conclusion Acknowledgments Author Contribution Statement References Chapter 10 Arachidonic Acid Distribution in Seaweed, Seagrass, Invertebrates and Dugong in Coral Reef Areas Abstract 1. Introduction 2. Methodology 3. Fatty Acid Composition I. Invertebrates Corals Crustaceans Shells II. Aquatic Plants Seaweed and Seagrass III. Dugong Conclusion Acknowledgments References Chapter 11 Coral Skeletons as a Recorder of Metal Pollution: Environmental Monitoring in the Gulf of Thailand Abstract 1. Introduction 2. Materials and Methods 2.1. Study Location 2.2. Sampling 2.3. Preparation of CaCO3 Matrix Standard 2.4. LA-ICP-MS Analysis 2.5. Stable Isotopic Analysis 3. Results 3.1. Seawater Temperature, Salinity, and Oxygen Isotope 3.2. Oxygen and Carbon Isotopes in Coral 3.3. Me/Ca in Coral 4. Discussion 4.1. Salinity and δ18Ow in Seawater, and Oxygen and Carbon Isotopes in Coral 4.2. B/Ca in Coral 4.3. Ba/Ca in Coral 4.4. V/Ca in Coral 4.5. Cd/Ca in Coral 4.6. Hg/Ca in Coral 4.7. Pb/Ca in Coral Conclusion Acknowledgments References Chapter 12 The Ratio of Constitutive and Reparative Neurogenesis in Pallium of Juvenile Masu Salmon (Oncorhynchus masou) Abstract Introduction PCNA Localization in the Masu Salmon Pallial PVZ in Norm and after a Mechanical Injury HuCD Localization in the Proliferative Zones and Parenchyma of the Masu Salmon Pallial PVZ in Norm and after a Mechanical Injury Conclusion Funding References Chapter 13 Neural Stem Cells in the Cerebellum of Juvenile Masu Salmon (Oncorhynchus masou) after Mechanical Injury Abstract Introduction Comparative Aspects of Adult Neural Stem Cell Activity in Amphibians and Fish Proliferation and Migration of Cells in Cerebellum of Fish GFAP, Doublecortine and Other Markers of NSCs in Cerebellum of Fish Conclusion Funding References Chapter 14 Catalase and Peroxidase in Black Sea Teleosts: Evolutionary, Systematical, and Physiological Peculiarities Abstract 1. Introduction 2. Enzyme Activities and Fish Phylogenic Position 3. Biological Peculiarities of Fish 3.1. Early Development and Ageing 3.2. Reproductive Strategy and Gender Peculiarities 3.3. Diet and Food Deprivation 3.4. Swimming Activity 4. Abiotic Conditions 4.1. Ecological Specificity of Abundance 4.2. Salinity 4.3. Pressure and Deep Sea Conditions 4.4. Oxygen Availability 4.5. Temperature 5. Anthropogenic Impact Conclusion References Chapter 15 The Teleost Retina as a Model for Regenerative Medicine Abstract Adaptations of the Fish Eye The Fish Retina Fish Eye Development and Retinogenesis Stem Cell Niches in the Teleost Retina Healthy Retina Ciliary Marginal Zone (CMZ) Müller Glia Injured Retina: Regeneration Therapeutic Applications References Chapter 16 Importance of Benthos in the Trophic Structure of the Ichthyofauna of Los Frailes Reef, Gulf of California, Mexico Abstract Introduction Composition of the Fish Community Abundance Classification of Species According to Their Relative Abundance Trophic Organization Functional Trophic Groups Diagram of Biomass Flow in the Reef Discussion Habitat Structural Complexity Fish Community Composition Trophic Organization of the Fish Community Effect of Benthic Structural Complexity on the Trophic Organization of the Ichthyofauna of the Los Frailes Reef Conclusion Acknowledgments References Chapter 17 Marine Seaweeds of the Yucatan Peninsula: Diversity, Economic Importance and Conservation Abstract Introduction Study Area Results Conservation Acknowledgments References Chapter 18 Benthic Assemblages in South American Intertidal Rocky Shores: Biodiversity, Services, and Threats Abstract Introduction The Intertidal Rocky Shores in South America: Main Features and Associated Biodiversity The Caribbean Colombia Venezuela Trinidad and Tobago The Atlantic Brazil The Northeast: Ceara The Northeast: Sergipe The Northeast: Bahia The Southeast: Espírito Santo The Southeast: São Paulo The South: Paraná and Santa Catarina Uruguay Argentina The Pacific Colombia Ecuador Peru Chile Northern Chile: Iquique, Antofagasta and Copiapó Central-Northern Chile: Coquimbo, Los Vilos and San Antonio Central-Southern Chile: Concepción and Valdivia Southern Chile: Punta Arenas Uses and Threats to the Intertidal Rocky Shores in South America The Caribbean The Atlantic The Pacific Gaps in Our Knowledge and Future Prospects Acknowledgments References Chapter 19 Evaluation of Biomass and Reproductive Aspects of Invasive Algae Acanthophora spicifera in Punta Roca Caimancito B.C.S. Mexico Abstract Introduction Ecological and Economic Impact of Marine Invasive Species Impact on Coral Reef Economic Importance Algae Introduced Acanthophora spicifera an Invasive Seaweed Description of Genus Description of the Species Geographical Distribution Floristic Records of Algae Study Area Materials and Methods Results Environmental Conditions General Features and Morphological of Punta Roca Acanthophora spicifera in Punta Roca Caimancito Percentage of Wet and Dry Weight Flora and Fauna of Acanthophora spicifera Discussion Conclusion Recommendation Annex References Chapter 20 Environmental Impacts on Marine Benthic Communities in an Industrialized Caribbean Island-Trinidad and Tobago Abstract Introduction Brief Review of Local Benthic Ecological Assessments Environmental Impacts on Macrobenthos in the Point Lisas Industrial Estate (PLIE) Coastal Area Materials and Methods General Results Discussion Acknowledgments References Chapter 21 Prediction of Zostera marina Shoot Growth, Leaf Production, Leaf Area and Shoot Weight Using the Sheath Length Abstract Introduction Materials and Methods Results Discussion Acknowledgments References Chapter 22 Distribution and Ecology of the Pacific Lobsterette Nephropsis occidentalis Faxon, 1893 (Crustacea, Decapoda, Astacidea), on the Continental Slope Off Western Mexico Abstract Introduction Material and Methods The Mexican Pacific Sampling of Biological Data Sampling of Environmental Data Sediment Sampling and Analysis Data Analyses Population Structure Environmental Variables Drivers of Population Structure Worldwide Distribution Results The Mexican Pacific Population Structure Environmental Variables Drivers of Population Structure Worldwide Distribution Discussion Mexican Pacific Population Structure Environmental Drivers of the Distribution of the Pacific Lobsterette Worldwide Patterns of Distribution Fishery Potential Outlook Acknowledgments References Chapter 23 Sea Turtles as Ecosystem Indicators: Situation in Mexico Abstract Introduction Biodiversity of Sea Turtles in Mexico Threats to Sea Turtles Climate Change Pollution Pesticides Hydrocarbons Heavy Metals Sewage and Garbage Damage Caused by the Lights on Nesting Beaches Challenges References Chapter 24 Similarity in Mollusk Assemblages Associated with Conspicuous Habitat Formers in Northwest México Abstract Introduction Study Site Field Sampling Laboratory Analyses Feeding Habits and Feeding Guilds Data Analysis Results Fauna Composition Similarity and Taxocenosis Structure Discussion Appendix References Chapter 25 A Critique of the Environmental Impact Studies in México Based on Two Study Cases Abstract Introduction Dolphins, Mangroves and El Mogote Marina Azul and the Accumulative and Synergic Impacts Conclusion References Chapter 26 The Key Role of the Species Hediste diversicolor (Polychaeta, Nereididae) in Estuarine Ecosystems Abstract 1. Introduction 2. Materials and Methods 3. Population Dynamics of Hediste diversicolor Comparison with Other Estuaries 4. Bioturbation Activity of Hediste diversicolor 4.1. Bioturbation Activity of Hediste diversicolor in the Loire Estuary 4.2. Bioturbation Activity of Hediste diversicolor in the Nereis Park Experiment References Chapter 27 Hox-Genes in the Ontogenesis of Polychaetes Abstract 1. Introduction 2. Polychaetes: What Are They? 3. Set and Structure of Hox-Clusters in Polychaetes 4. Expression Patterns of Hox-Genes 4.1. Chaetopterus variopedatus 4.2. Capitella teleta 4.3. Alitta virens and Platynereis dumerilii 5. What Do Polychaetes Tell Us about Urbilateria? 6. Hox-Genes and Larval Development References Chapter 28 Dynamics of the Stress Protein Content in the White Sea Mussel Mytilus edulis L. in Course of Salinity Adaptation Abstract Introduction Material and Methods Results Discussion Acknowledgment References Chapter 29 Novel Fibrinogenolytic Metalloprotease from the Antarctic Scallop (Adamussium colbecki) Abstract Introduction Conclusion References Chapter 30 Investigation of Marine Biotoxins and Human Toxicity Abstract Abbreviations Impact of the Harmful Algal Blooms in the Marine Ecosystems Human Toxicity of the Marine Biotoxins Methods of Detection of the Marine Biotoxins The Monitoring Programs in Molluscs from the Adriatic Sea, Italy Conclusion References Chapter 31 Natural Products from Marine Sponges: Current Status and Future Potential for Novel Drugs Abstract 1. Introduction 2. Marine Natural Product 3. Milestones in Research on Marine Natural Products 4. Current Marine Pharmaceutical Pipeline 5. Sponges (Porifera) as a Source of Drug Treasure Trove 6. Marine Sponges and Natural Chemical Components 7. Pharmacological Potency of Marine Sponges 7.1. Anti-Oxidant Activity 7.2. Anti-Bacterial Activity 7.3. Anti-Fungal Activity 7.4. Anti-Viral Activity 7.5. Anti-Malarial Activity 7.6. Marine Invertebrates with Anti-Inflammatory Properties 7.7. Anti-Coagulating Activity 7.8. Marine Sponges with Anti-Tumour Properties Cytarabine Halichondrin B Hemiasterlins Discodermolide Spongistatin 1 8. Future Prospects of Sponge-Derived Natural Products in Drug Discovery Conclusion References Chapter 32 Black Vultures (Coragyps atratus) Foraging on Olive Ridley (Lepidochelys olivacea) Sea Turtle Eggs and Hatchlings Abstract Methods Results Discussion Acknowledgments References Chapter 33 Mitigation Strategies for the Reduction of Sea Turtle Bycatch in the Mediterranean Bottom Trawl Fisheries Abstract Introduction Methods Study Area Assessment of Turtle-Trawl Interaction Telemetry Data VMS Data Interaction Index Flexible Turtle Excluder Device (TED) Trawl Gear and TED Specifications Study of Gear and TED Performance Catch Analysis Results Identification of Turtle-Trawl Interaction Flexible Turtle Excluder Device (TED) Performance Gear Behaviour Catch Efficiency Conclusion Acknowledgments References Chapter 34 Spatial-Temporal Distribution of Kemp's Ridley Turtles (Lepidochelys kempi) and Green Turtles (Chelonia mydas) Nests in a Beach of the North of Veracruz, Mexico Abstract Introduction Methods Data Recording Nests Distribution per Area Nests Distribution per Site Results Nests Number per Month Spatial-Temporal Distribution of Nests Nest Distribution per Zone (A, B and C) Nests Distribution per Site Discussion Conclusion Acknowledgments References Chapter 35 Marine Turtles: Conservation Strategies and Future Research Abstract 1. Introduction 2. Conservation Strategies and Future Research on Reproductive Areas 2.1. Population Genetic Structure Phylogeographic Relationships 2.2. Natal Homing 2.3. Temperature Dependent Sex Determination 2.4. Environmental Conditions Affecting Embryonic Development 3. Conservation Strategies and Future Research on Oceanic Phases 3.1. Migratory Routes and Movements 3.2. Foraging Grounds Conclusion References Chapter 36 Spirorchiidiosis and Other Forms of Parasitosis in Sea Turtles on the Coast of Brazil Abstract Introduction Methods The Family Spirorchiidae Spirorchiidiosis in Sea Turtles on the Coast of Brazil Spirorchiidiosis in Chelonia mydas Spirorchiidiosis in Eretmochelys imbricata Spirorchiidiosis in Lepidochelys olivacea Parasites in Sea Turtles on the Coast of Brazil Parasites in Chelonia mydas Helminths Reported in Green Sea Turtles on the Coast of Brazil Parasites in Eretmochelys imbricata Helminths Reported for the Hawksbill Sea Turtle along the Coast of Brazil Parasites of Caretta caretta Helminths Reported in the Loggerhead Sea Turtle along the Coast of Brazil Parasites of Dermochelys coriacea Parasites of Lepidochelys olivacea Challenges for the Future Acknowledgments References Biographical Sketches Chapter 37 Effect of Clays on Removal of Okadaic Acid from Seawater Abstract 1. Introduction 2. Materials and Methods 2.1. Selection of Clays 2.2. Seawater Sampling 2.3. Clay Suspensions Preparation 2.4. Okadaic Acid Analysis 3. Results 4. Discussion Conclusion Acknowledgments References Chapter 38 Helminth Diversity of Cetaceans: An Update Abstract Parasitism in Cetaceans Helminths of Cetaceans Acknowledgments References Chapter 39 Influenza Viruses: A Threat to Marine Mammals Populations Abstract Introduction Influenza Outbreaks in Seal and Whale Populations Genetic Background of Marine Mammals Influenza Viruses Marine Mammals and Public Health Conclusion References Chapter 40 Ecological Interdependence in Marine Habitats: Bio-Economic Management of a Spanish Mixed Fishery Abstract Introduction The European Hake and Blue Whiting Mixed Fishery An Applied Management Model Conclusion Acknowledgments References Biographical Sketches Chapter 41 Marine Sponge Compounds with Anti-Inflammatory Activity in 2012–2016; and Their Mechanism of Action Abstract 1. Introduction 2. Marine Sponge’s Anti-Inflammatory Activity 3. Chemical Structures of Compounds Isolated and Their Mechanism of Action 4. Anti-Inflammatory Activities of Bacteria Associated with Marine Sponges 5. Synthetic Compounds from the Marine Sponge Compounds Lead Conclusion References Chapter 42 Trophic Ecology of the Shortfin Mako Isurus oxyrinchus (Lamniformes: Lamnidae) in the Eastern Pacific Ocean Abstract 1. Introduction 2. Methods and Statistical Analyses Applied in the Trophic Ecology of Isurus oxyrinchus 2.1. Stomach Content Analysis Applied to the Trophic Ecology of Isurus oxyrinchus 2.1.1. Prey Identification 2.1.2. Cumulative Prey Curves 2.1.3. Diet Analysis 2.1.4. Trophic Overlap 2.1.5. Niche Breadth and Trophic Level 2.1.6. Feeding Strategy 2.1.7. Consumption by Sharks of Key Prey Species 2.2. Stable Isotopic Analysis 2.2.1. Sampling and Isotopic Analysis 2.2.2. Trophic Level Based on Isotope Values 2.3. Trophic Ecology of Isurus oxyrinchus in the Eastern Pacific 2.3.1. Feeding Habits of Isurus oxyrinchus 2.3.2. Stable Isotopic Analysis of Isurus oxyrinchus 3. Feeding Description of Isurus oxyrinchus in the Eastern Pacific Ocean 3.1. Results of Stomach Content Analysis 3.1.1. Central Area “Ecuadorian Pacific” General Description of I. oxyrinchus Caught in the Central Area Prey Identification 3.1.2. Northern and Southern Pacific Areas Prey Identification 3.1.3. Trophic Overlap 3.1.4. Niche Breadth and Trophic Level 3.1.5. Feeding Strategy 3.1.6. Consumption of Fish and Squid by Isurus oxyrinchus 3.2. Results of Stable Isotope Analysis 4. Discussion 4.1. Feeding Habits in the Eastern Pacific Ocean 4.2. Variation in Diet in the Three Areas of the Eastern Pacific Ocean 4.3. Niche Breadth and Trophic Level 4.4. Feeding Strategy 4.5. Consumption of Fish and Squids by Isurus oxyrinchus 4.6. Stable Isotopic Analysis of Isurus oxyrinchus Conclusion Acknowledgments References Chapter 43 Biomarker Response in Black Sea Scorpion Fish Scorpaena porcus to Anthropogenic Impact Abstract 1. Introduction 2. Materials and Methods 2.1. Materials 2.2. Biochemical Assays Antioxidant Enzyme Activities Aminotransferases Activity Cholinesterase (ChE) Activity Oxidized Proteins (OP) Concentration TBARS Level Chemiluminescence Analysis Total Soluble Protein Concentration 2.3. Statistical Analysis 3. Results 3.1. Ecological Characteristics of Tested Sites 3.2. Biomarkers Response Antioxidant Enzyme Activity Cholinesterase Activity Aminotransferase Activity TBARS Concentration Chemiluminescence Level Oxidized Proteins (OP) Concentration 4. Discussion Conclusion Acknowledgments References Chapter 44 Aquatic Invasive Species: Additional Steps Could Help Measure Federal Progress in Achieving Strategic Goals* Why GAO Did This Study What GAO Recommends What GAO Found Abbreviations Background Task Force Member Agencies Estimated Expending an Average of about $260 Million Annually to Address Aquatic Invasive Species in Fiscal Years 2012 through 2014 Task Force Member Agencies Conducted a Wide Range of Activities and Identified Several Challenges in Addressing Aquatic Invasive Species Prevention Early Detection and Rapid Response Control and Management Restoration Research Education and Public Awareness Leadership and International Cooperation The Task Force Has Not Taken Key Steps to Measure Progress in Achieving Its Strategic Goals Conclusion Recommendation for Executive Action Agency Comments and Our Evaluation Appendix I: Objectives, Scope, and Methodology Appendix II: Examples of Aquatic Invasive Species and Their Reported Presence by State, and Common Pathways Appendix III: Aquatic Invasive Species Activities Conducted by Task Force Member Agencies End Notes End Notes for Appendix I Chapter 45 Aquatic Nuisance Species Task Force Strategic Plan (2013-2017)( Executive Summary Introduction Environmental Harm Economic Harm Harm to Human Health ANS - What Can Be Done? Future Challenges Structure of the Aquatic Nuisance Species Task Force Federal and Ex-Officio Members ANSTF Regional Panels ANSTF Committees ANSTF Strategic Plan ANSTF Operational Plan Coordination with Other Federal and State Invasive Species Management Plans Conclusion Goal 1: Coordination - Maximize the Organizational Effectiveness of the Aquatic Nuisance Species Task Force Objective 1.1: Strengthen the Coordination Capacity of the ANSTF Objective 1.2: Evaluate the Ability of Statutory Authorities, Regulations, and Programs Necessary to Implement ANSTF Goals and Objectives Objective 1.3: Facilitate the Development and Continued Effectiveness of State and Interstate ANS Management Plans Objective 1.4: Coordinate the Development and Implementation of ANSTF- Approved Species Control and Management Plans and Pathway Management Plans Objective 1.5: Cooperate with Nations That Have Neighboring Waters and Shared Pathways with the United States to Prevent, Detect, and Control ANS Goal 2: Prevention - Develop Strategies to Identify and Prevent the Establishment of New and Slow the Spread of Existing ANS in the Waters of the United States Objective 2.1: Take Steps to Interdict Specific Pathways by Developing and Implementing Guidance and Appropriate Measures Objective 2.2: Facilitate Use of Science-Based Risk Assessment and Screening Procedures to Assess and Prioritize Pathways for the Introduction of ANS or Potential Species of Concern Objective 2.3: Expand Training and Use of the Hazard Analysis and Critical Control Point (HACCP) Program into Work Conducted by Natural Resource Managers Goal 3: Early Detection and Rapid Response - Identify and Respond to Aquatic Nuisance Species within a Timely Manner Following Introduction in Order to Prevent Their Establishment and/or Spread Objective 3.1: Facilitate Surveys and Monitoring to Detect ANS Objective 3.2: Make Taxonomic and Ecological Information and Expertise Readily Available Objective 3.3: Increase Public and Industry Involvement in Early Detection and Rapid Response Programs Objective 3.4: Facilitate Development of Rapid Response Contingency Plans Objective 3.5: Build Capacity to Respond Rapidly to Invasions Goal 4: Control and Management - Control Established Aquatic Nuisance Species When Feasible and When the Benefits of Managing the Established Species Outweigh the Costs of Removing Them with Respect to Harm to the Environment, the Economy, and Public ... Objective 4.1: Support and Evaluate ANSTF-Approved Control and Management Plans Objective 4.2: Increase Invasive Species Training for Natural Resource Managers and Leverage Participation Objective 4.3: Evaluate the Benefits and Risks Associated with the Commercial Harvest of ANS as a Means of Control or Eradication Objective 4.4: Encourage an Integrated Pest Management (IPM)25 Approach to Manage Existing ANS Populations Goal 5: Restoration – Protect and Rehabilitate Native Species and Ecosystems by Conducting Habitat Restoration Efforts on Multiple Scales Objective 5.1: Restore Impacted Ecosystems Objective 5.2: Address and Provide Technical Assistance for Invasive Species Management before, during, and after Habitat Restoration Projects Goal 6: Education and Outreach - Increase Awareness Concerning the Threats of Aquatic Nuisance Species, Emphasizing the Impacts, Importance of Prevention and Containment, and Recommendations for Appropriate Domestic and International Actions Objective 6.1: Increase Understanding Among the General Public of the Problems and Impacts Associated with ANS and Actions That Can Be Taken to Prevent and Control ANS in Waters of the United States Objective 6.2: Disseminate ANS Outreach and Technical Guidance Materials to Target Audiences Objective 6.3: Promote the Use of Guidance Documents, Best Management Practices (Bmps)26, and Other Outreach Materials Related to ANS Objective 6.4: Promote Awareness of the ANSTF and Its Activities and Provide Educational Briefings on ANS Threats and Solutions and to Legislators and Other Decision Makers Goal 7: Research - Facilitate Research to Address Environmental, Economic, and Human Health Risks and Impacts Associated with Aquatic Nuisance Species Objective 7.1: Develop and Maintain a List of ANS Research Priorities; Communicate This List to the Scientific Community Objective 7.2: Develop and Maintain Guidance Documents, Protocols, and Best Management Practices (BMPs) Related to ANS Objective 7.3: Track the Progress of Research Activities Funded or Prioritized by the ANSTF Objective 7.4: Support Development of Socio-Economic Research and Methods to Quantify the Economic Impact of ANS Objective 7.5: Support Research on Interdiction Methods for Specific Pathways of ANS30 Objective 7.6: Support Efforts to Identify Gaps and Expand Research Relevant to Control and Eradication Measures to Address ANS That Have Become Established in Waters of the United States Objective 7.7: Encourage Research to Develop Species Invasion-Risk Forecast Tools Objective 7.8: Support Existing Databases and Global Database Networks So National and Worldwide Decision-Support Information for Invasive Species Management Is Accessible, Transparent, and Accurate Goal 8: Funding - Coordinate Federal Agency Budgets to Support the Aquatic Nuisance Species Task Force’s Priorities and Establish a Clear Process That Links State and Regional Needs in Their Areas of Responsibility Objective 8.1: Secure Dedicated, Long-Term Funding for the ANSTF Strategic Plan Actions Objective 8.2: Optimize Use of Current Funding for ANS Activities by Engaging Potential Resources and Programs Within Federal Agencies and Additional Partners Objective 8.3: Develop a List of ANS Funding Priorities Appendix 1: List of Acronyms End Notes Chapter 46 A New Late Triassic (Warepan: Middle to Late Norian) Orthoconic Nautiloid from New Zealand and New Caledonia Abstract Introduction Systematics Genus Stipamonotis Grant-Mackie, n. gen. Type Derivation of Name Diagnosis Comments Stipamonotis herangiae Grant-Mackie, n. sp. (Figure 4) Derivation of Name Holotype Paratypes Additional Material Diagnosis Description Comments Associated Biota Age Acknowledgments Appendix 1 References Chapter 47 Combined Effects of Ocean Acidification and Salinity on Foraging Behaviour of Intertidal Scavenging Gastropod Nassarius festivus Abstract Introduction Materials and Methods Study Organisms Experimental Setup Food Detection Experiment Statistical Analysis Results Food Detection Time Percentage of Individuals Engaged in Foraging Discussion References Chapter 48 Oxidative Effects in Aquatic Organisms Exposed to Lipophilic Marine Biotoxins Oxidative Stress and Antioxidant Response Harmful Algal Blooms and Lipophilic Marine Biotoxins Okadaic Acid-Group (OA-Group) Yessotoxins-Group (YTX-Group) Pectenotoxins-Group (PTX-Group) Azaspiracids-Group (AZA-Group) Levels of Oxidative Stress in Marine Organisms Exposed to Lipophilic Marine Biotoxins Conclusion Acknowledgment References Chapter 49 The Jumbo Flying Squid (Dosidicus gigas) off of Costa Rica Abstract Introduction Results 1. Fishery 1.1. Catch and Its Relationship with Environmental Factors 1.2. Fishing Technology 2. Hard Structure 2.1. Statolith 2.2. Beak 2.3. Gladius 3. Biology 3.1. Size, Age and Hatching Time 3.2. The Relationship between ML and BW 3.3. Maturity 3.4. Growth and Growth Rates 3.5. Diet References Chapter 50 Spatial Distribution and Species Composition of Zooplankton in the Eastern Tropical Pacific Ocean Waters Off Costa Rica Abstract 1. Introduction 2. Results 2.1. Total Biomass and Abundance 2.2. Composition of Zooplankton 2.3. Distribution and Frequency of Zooplankton Appendix: Zooplankton Species List References Chapter 51 Turbot Aquaculture in Spain: An Overview Abstract 1. Introduction 2. Biology and Habitat of the Turbot 3. Turbot Farming 4. Spanish Research on Turbot Aquaculture 4.1. Farming Research 4.2. Vaccine Research 4.3. Genetic Research 5. The Spanish Turbot Industry 6. Turbot Production in Spain 6.1. Production Volume 6.2. Production Value 6.3. Markets for Turbo Production 7. Future Outlook and Challenges for Spanish Turbot Farming Acknowledgments References Chapter 52 The Gregarious Behavior of Marine Fish and Their Relation to Fishing Abstract Introduction Advantages and Disadvantages of Grouping Behavior Advantages Disadvantages Grouping’s Structure Influence of the Behavior of Grouping Type in the Development of Fishing Activity Industrial Fisheries of Shoals and Schools Pelagic Fisheries with Purse Seine Net Pelagic Fisheries with Midwater Trawl Net Pelagic Fisheries with Set Nets References Chapter 53 The Interaction of Aquatic Organisms (Mytilus sp.) with Harmful Algal Blooms: Composition, Distribution and Metabolism of Lipophilic Marine Biotoxins in the Austral Pacific Fjords Abstract 1. Introduction 2. Lipophilic Marine Biotoxins 2.1. Okadaic Acid Group 2.2. Yessotoxins Group 2.3. Pectenotoxins Group 2.4. Azaspiracid Toxins Group 3. Composition and Biotransformation of Lipophilic Marine Biotoxins in Mussels 4. Impact of Lipophilic Marine Biotoxins on Aquaculture Development in the South Pacific Fjords Conclusion Acknowledgment References Chapter 54 The Effect of the Nitrogen-Source Modification and the Addition of CO2 on the Growth and Composition of Lipids in Nannochlorospis Sp. Abstract 1. Introduction 1.1. Microalgae 1.2. Eustigmatophyceae 1.3. Nannochloropsis 2. Effect of Nitrogen-Source Modification and CO2 Addition on Nannochloropsis sp. 2.1. Effect of CO2 Addition on Nannochloropsis Cultures 2.2. Effect of the Nitrogen Source on Nannochloropsis Cultures 2.3. Effect of Nitrogen-Source Modification and CO2 Addition on the Content and Profile of Lipids 2.3.1. Fatty Acid Profile Conclusion References Chapter 55 Potential of Nannochloropsis in Beta Glucan Production Abstract 1. Introduction 1.1. Carbohydrate Metabolism in Microalgae 1.2. Factors and Strategies to Improve βG Production from Nannochloropsis Metabolis Type Temperature Osmotic Stress Lighting Type and Intensity Nutrient Limitation Supply Inorganic Carbon Production of βG in Two-Stage Process 1.3. Molecular Structure and Capacity as Immunostimulants of βG 1.4. Characterization of Microalgal βG 2. Materials and Methods 2.1. Microalgae Strain and Cultures 2.2. Determination of Dry Weight and Organic and Inorganic Content 2.3. Total Carbohydrates Determination 2.4. Enzymatic Quantification of Beta Glucans 2.5. Volumetric Productivity of Beta Glucans 2.6. Statistical Analysis 3. Results 3.1. Growth Curve 3.2. Volumetric Production of Biomass and Carbohydrates Accumulation 3.3. Cellular and Volumetric Productivity of Beta Glucans 4. Discussion Conclusion Acknowledgments References Chapter 56 Pulsed Electric Field (PEF) Assisted Protein Extraction from Nannochloropsis Abstract 1. Introduction 2. Basic Technological Description of Electropulsation 3. A Biophysical Description 3.1. An Electric Field Has Physical Effects 3.1.1. Electrochemistry at the Electrodes (pH, Corrosion) 3.1.2. Electrophoresis in the Suspension 3.1.3. Electrophoresis in the Cell Membrane 3.1.4. Stretching of the Cell 3.1.5. Induction of Acoustic Shock Waves 3.2. The External Field Induces Membrane Potential Difference Modulation 3.3. Electropermeabilization 4. Materials 4.1. Analytical Methods 4.1.1. Analysis of Ionic Components 4.1.2. Analysis of Proteins 4.2. Physical Techniques of Cell Disruption 4.2.1. LFLP (Low Field Long Pulse) 4.2.2. HFSP (High Field Short Pulse) 4.2.3. HVED (High Voltage Electrical Discharge) 5. Results 5.1. LFLP 5.1.1. Microalgae Electropermeabilization 5.1.2. Protein Extraction from N. salina 5.2. HFSP and HVED Treatments 5.2.1. Microalgae Electropermeabilization 5.2.2. Microscopic Observations 5.2.3. Protein Extraction Conclusion Acknowledgments References Chapter 57 Recent Advances in the Utilization of Nannochloropsis Biomass for Commodity Chemicals, Feeds, High Value Products, Biofuels, Cosmetics, Fertilizers, and Materials Production Abstract 1. Introduction 2. Commodity Chemicals Production from Nannochloropsis 2.1. Lipids Production via Solvent Extraction 2.2. Biocrude Production via Thermal Process 2.3. Sugars Production via Enzymatic and Acidic Hydrolysis 2.4. Lactic Acid Production via Fermentation 2.5. Protein Isolation from Defatted Nannochloropsis sp. Biomass 3. Aquaculture and Animal Feeds Production from Nannochloropsis 3.1. Aquaculture Feed Production from Nannochloropsis 3.2. Animal Feed Production from Nannochloropsis 4. High Value Products Production from Nannochloropsis 4.1. Production of Eicosapentaenoic Acid (EPA) from Nannochloropsis 4.2. Production of Pigments from Nannochloropsis 5. Biofuels Production from Nannochloropsis 5.1. Biodiesel Production from Nannochloropsis 5.2. Biodiesel Production from Nannochloropsis via Chemical Heterogeneous Catalysis 5.3. Biodiesel Production from Nannochloropsis via Chemical Homogeneous Catalysis 5.4. Biodiesel Production from Nannochloropsis via Enzymatic Catalysis 5.5. Biodiesel Production from Nannochloropsis via Supercritical CO2 5.6. BioH2 Production from Nannochloropsis 6. Cosmeceuticals Production from Nannochloropsis 7. Solid Biofertilizers Production from Nannochloropsis 8. Materials Production from Nannochloropsis 9. Challenges and Future Perspectives of Nannochloropsis for Biorefinery Acknowledgment References Chapter 58 Genetic Improvement of Microalgae Nannochloropsis Species Abstract Introduction Genetic Modification Approaches in Nannochloropsis Species Particle Bombardment Electroporation Agrobacterium tumefaciens-Mediated Genetic Transformation Mutagenesis Selection Markers Applied to the Transformation Selective Marker of Antibiotic-Resistant and Reporter Genes GUS and GFP Reporter Genes Applied to Nannochloropsis Species Expression of Foreign Proteins Applied for Aquaculture and Lipid Biosynthesis Reverse Genetic Approaches of Silencing, Knockout and Knockdown in Nannochloropsis Species Homologous Recombination CRISPR/Cas9 System RNA Interference (RNAi)-Mediated Gene Silencing Biosynthesis Mutation in Nannochloropsis Mutation to Enhance Lipid Productivity and Change Lipid Content Mutation to Improve Pigment Productivity Mutation to Increase Photosynthesis Efficiency and Biomass Productivity Future Perspectives The Expression Level of Foreign Protein in Chloroplast Promoter Used in Gene Construct for Transformation Codon Usage Further Improvement of Selective Marker System References Biographical Sketches Chapter 59 Nannochloropsis oculata and Integrated Biorefinery Based on Palm Oil Milling Abstract 1. Introduction 2. Factors Affecting Nannochloropsis oculata Cultivation 2.1. Effects of pH, Salinity and Light Intensity 2.2. Effects of Macro and Micronutrients 2.3. Effects of Reactor Configuration 3. Different Types of Biorefinery 3.1. Oil Recovery Biorefinery 3.2. Biogas Biorefinery 3.3. Sugar Feedstock Biorefinery 3.4. Thermo-Chemical Biorefinery 4. Palm Oil Mill Biorefinery 4.1. Algal Biomass Co-Utilization 4.2. Cellulose Extraction and the Biocomposite Materials 5. Bioproducts from Algal Feedstock 6. Cost-Estimation Analyses Conclusion References Chapter 60 Trends in Copepod Studies Abstract 1. Introduction 2. Trends in Copepod Studies – Summary of Contributions Acknowledgments References Chapter 61 Using the Continuous Plankton Recorder to Study the Distribution and Ecology of Marine Pelagic Copepods Abstract 1. Introduction 1.1. Why Use a CPR and CPR Methodology? 1.2. Copepod Taxa Recorded by the Survey 2. What Can CPR Data Be Used for? 2.1. Mapping Copepod Biogeography 2.2. Disentangling Short-Term and Rhythmic Variations from Long-Term Trends 2.3. Monitoring Northward Shifts and Range Expansions 2.4. Observing Phenological Changes 2.5. Detecting Non-Native Species 2.6. CPR Copepod Data and Policy 3. Future of the CPR Survey 3.1. Sample Archive and Molecular Methods 3.2. Copepods and Human Health 3.3. Instrumentation Conclusion Acknowledgments References Chapter 62 Global Distribution of Tropical and Subtropical Copepods Abstract 1. Introduction 2. Materials and Methods 3. Results 3.1. Abundance and Distribution 3.2. Copepod Community Structure 4. Discussion Acknowledgments References Chapter 63 Biogeographical Distribution and Ecology of the Planktonic Copepod Oithona davisae: Rapid Invasion in Lakes Faro and Ganzirri (Central Mediterranean Sea) Abstract 1. Introduction 2. Distribution and Ecology of Oithona davisae 2.1. Biogeographic Distribution 2.2. Habitat Characteristics 2.3. Ecology 2.4. Dispersal 3. Oithona davisae in the Central Mediterranean Sea (Lakes Faro and Ganzirri, Sicily, Italy) 3.1. Study Area 3.2. Materials and Methods 3.3. Results 3.3.1. Seasonal Variations of Environmental Factors 3.3.2. Seasonal Variations in Abundance of Oithona davisae Conclusion Acknowledgments References Chapter 64 Impact of the Invasive Species Acartia tonsa on the Distribution of Autochthonous Acartiidae Species in Estuaries of the Bay of Biscay Abstract 1. Introduction 2. Material and Methods 2.1. Study Area 2.1.1. Estuary of Bilbao 2.1.2. Estuary of Urdaibai 2.2. Data Source 2.3. Data Treatment 3. Results 3.1. Environmental Conditions 3.2. Spatial and Temporal Distribution of Acartiidae Species 3.3. Species Segregation in Environmental Gradients 3.4. Niche Breadth and Overlap Conclusion Acknowledgments References Chapter 65 Can Changes in the Distribution of Two Congeneric Copepods (Acartia clausi vs. Acartia tonsa) Constitute a Sign of Recovery for the Anthropized Berre Lagoon (France, Mediterranean Sea)? Abstract 1. Introduction 2. Methods 2.1. Study Site and Sampling Strategy 2.2. Environmental Parameters 2.3. Metazooplankton Community 2.4. Data Analysis 3. Results 3.1. Environmental Parameters 3.2. Spatiotemporal Variations of Zooplankton Community and Acartia Populations 3.3. Effects of Environmental Factors on Acartia Distribution Conclusion Acknowledgments References Chapter 66 The Impact of Conspicuous Environmental Changes on the Spatial and Temporal Dynamics of Acartia tonsa and Acartia clausi: A Decadal Study in a Temperate Estuary (Mondego, Portugal) Abstract 1. Introduction 2. Methods 2.1. Study Area 2.2. Environmental and Biological Data 2.3. Statistical Analysis 3. Results 3.1. Variabilty of Environmental Parameters and Acartia Abundance 3.2. Acartia Variability in Relation to Environmental Parameters 3.2.1. CUSUM Analysis of Time-Series 3.2.2. Interstructure Analysis of the Years 3.2.3. Compromise Analysis 3.2.4. Trajectories Analysis Conclusion Acknowledgments References Chapter 67 Temperature, Salinity and Oxygen Concentration in Life Cycle Traits of the Black Sea Copepods Abstract 1. Introduction 2. Salinity Tolerance of the Black Sea Species and Their Congeneric Populations from the Marmara and Ionian Seas 2.1. Salinity Tolerance in Calanipeda aquaedulcis and Arctodiaptomus salinus 2.2. Salinity Tolerance of Native Acartia clausi and Alien Acartia tonsa 2.3. Salinity Tolerance of the Copepods from the Genus Oithona 2.4. Salinity Tolerance of Calanus helgolandicus 2.5. Types of Osmotic Response in the Black Sea Copepods 2.6. Copepod Egg Salinity Tolerance 2.7. Effect of Salinity on Copepod Respiration Rate 3. Effect of Temperature 3.1. Effect of Temperature on Respiration Rate 3.2. Effect of Temperature on Moving Activity 3.3. Temperature Impact on the Life Cycle and Respiration Rate of the Black Sea Native and Alien Species 4. Tolerance of the Black Sea Copepods to Oxygen Deficiency Stress 4.1. Effect of Oxygen Concentration on Energy Metabolism of the Migrating and Diapausing Calanus helgolandicus 4.2. Effect of Oxygen Concentration on Respiration Rate of Calanipeda aquaedulcis and Arctodiaptomus salinus 4.3. Energy Benefits of the Development of Calanus helgolandicus in the Black Sea Environment Conclusion Acknowledgments References Chapter 68 The Biology of Myelin in Calanoid Copepods Abstract 1. Introduction 2. Structure and Function of Copepod Myelin 2.1. Copepod Myelin is an Axonal Sheath Composed of Multiple Concentric Layers of Membrane 2.2. Copepod Myelin is Produced by Nerve Cells, Not Glia 2.3. Myelin Functions by Electrically Insulating Axons 3. Copepod Myelin is Confined to More Recently Evolved Superfamilies 4. Body Size Does Not Correlate with Myelination 5. Myelinate Copepods Have Shorter Reaction Times Than Amyelinates 6. Myelinates Localize Sudden Hydrodynamic Disturbances Better Than Amyelinates 7. Do Milliseconds Matter? 8. Ecology of Myelin 8.1. Myelinates Dominate over Amyelinates in Marine Environments with High Visibility 8.2. Myelin is Correlated with Niche Separation between Co-Occurring Myelinate and Amyelinate Species 9. Invasion of the Pelagic Environment and Evolution of Myelin Conclusion Acknowledgments References Chapter 69 Evasion from Predation: Understanding Copepod Escape Behavior in Relation to Predator Capture Strategies Abstract 1. Introduction 2. Detection of Predators 3. Generation of an Escape Jump 4. Non-Visual Predators 5. Visual Predators 6. Effect of Water Motion 7. Effect of Temperature and Viscosity Conclusion Funding References Chapter 70 Chemosensation and a Potential Neuronal Mechanism of Ratio Detection in a Copepod Abstract Abbreviations 1. Introduction 2. Observations of Temora longicornis 3. The Spiking Neuron Model for Ratio Detection 4. Synaptic Weight Selection 5. Results Conclusion Acknowledgments References Chapter 71 Planktonic Calanoids Embark into the “Omics Era” Abstract 1. Introduction 2. Techniques 2.1. RT-qPCR 2.2. Microarray 2.3. EST and SSH 2.4. RNA-Seq and De Novo Assembly of Transcriptomes 3. The Target Species 4. Gene Expression Approach 4.1. RT-qPCR-Based Works 4.2. Microarrays and EST Libraries 4.3. RNA-Seq 5. Metabolomics and Proteomics 6. Genome Up-Dates Conclusion Acknowledgments References Chapter 72 Macroalgae for Functional Feed Development: Applications in Aquaculture, Ruminant and Swine Feed Industries Abstract 1. Introduction 2. Macroalgae as Source of Macro-Nutrients 2.1. Macroalgal Proteins 2.2. Macroalgal Polysaccharides 2.3. Macroalgal Fatty Acids 3. Macroalgae as Source of Micro-Nutrients 3.1. Minerals 3.2. Pigments 4. Macroalgae as Functional Feed 4.1. Aquaculture Nutrition 4.2. Ruminant Nutrition 4.3. Swine Nutrition 5. Future Prospects References Chapter 73 Environmental Impacts of Seaweed Co-Culture on Coastal Fisheries Abstract 1. Coastal Fisheries 1.1. Current Situation and Problems 1.1.1. Global Situation 1.1.2. Domestic Situation 1.1.3. Problems Facing Coastal Fisheries 1.1.3.1. Environmental Impact 1.1.3.2. Diseases 1.1.3.3. Fish Production 1.1.3.4. Social Concerns 1.1.3.5. Geographical Effects 1.2. Development Schemes 1.2.1. Existing Schemes 1.2.1.1. Environmental Monitoring 1.2.1.2. Feed Management 1.2.1.3. Limitations 1.2.1.4. Farming Site Management 1.2.2. Integrated Multitrophic Aquaculture 1.2.3. Use of Lugworm 2. Seaweeds 2.1. Diversity 2.1.1. Current State in Korea 2.1.2. Domestic Uses 2.2. Seaweed Culture 2.2.1. Positive Effects 2.2.1.1. Physical Aspects 2.2.1.2. Ecological Aspects 2.2.2. Negative Effects 2.2.2.1. Physical Aspects 2.2.2.2. Ecological Aspects 2.3. Seaweed Co-Culture 2.3.1. Role of IMTA 2.3.2. Association with Lugworm 2.4. Schemes for Diverse Uses 2.4.1. Acquisition of Useful Microbes from the Lugworm viscera 2.4.2. Biodegradation of Seaweeds 2.4.3. Others Conclusion Acknowledgments References Chapter 74 Sustainable Production of Seaweed in Malaysia: A Review of Policies and Future Prospects Abstract 1. Introduction 1.1. Seaweed Cultivation in Malaysia: An Overview 2. The Interventions of Malaysian Government Agencies in Seaweed Production 2.1. Mini Estate System (MES) and Cluster System (CS) as a New Approach in Seaweed Cultivation in Sabah, East Malaysia 3. Seaweed Socio-Economic Benefits to Malaysia’s Development 4. The Potential Usage of Seaweed in Business Ventures or Commercialisation 5. Prospect of Seaweed Industry and Way Forward Conclusion References Biographical Sketches Chapter 75 The Identification of Macroalgae and the Assessment of Intertidal Rocky Shores’ Ecological Statuses in the Central Western Coast of Continental Portugal Abstract Introduction Seashores of the Western Coast of Portugal (Peniche) Survey of the Phycological Flora Macroalgal Diversity and Community Structure Assessment of the Ecological Status of Coastal Water Bodies Conclusion Acknowledgments Annex I. Macroalgae Biodiversity in Images and Their Characteristics Chlorophyta – Green Algae Ochrophyta (Phaeophyceae) – Brown Algae Rodophyta – Red Algae References Chapter 76 Potential Applications of Ulva rigida for Biofuel and Biochemical Production Abstract Introduction Seaweeds as Biofuel Feedstock Unconventional Strategies for the Farming and Conversion of Ulva rigida to Bioethanol Continuous-Flow Solar-Energy-Driven SSF Process for the Conversion of Ulva rigida to Bioethanol Time-on-Stream Studies of Solar-Energy-Driven Bioethanol Production from Continuous-Flow SSF of Ulva rigida Can Seaweeds Be a Sustainable Feedstock for the Production of Levulinic Acid, a Key Economic Driver for the Biorefinery? Conclusion Acknowledgments References Biographical Sketches Chapter 77 Aluminium Impact on the Growth of Benthic Diatom Abstract 1. Introduction 2. Material and Methods 2.1. Sediments 2.2. Sediment Preparation and Benthic Diatom Cultivation Experiment in Response to Contamination by Aluminium 3. Results and Discussion 3.1. Sediments Contamination 3.2. Water Contamination 3.3. Impact of Aluminium Contamination on Benthic Diatom Growth Conclusion References Chapter 78 Evaluation of Micro-Fabric Network within Marine Sediments Based on a Rock Magnetic Technique Abstract 1. Introduction 2. Methodology: A Review 2.1. Anisotropy of Magnetic Susceptibility 2.2. Conventional Method 2.3. Ferrofluid Method 3. Case Study 3.1. Geological Background 3.2. Previous Studies 3.3. Experimental Scheme 4. Results 5. Discussion 5.1. AMS Fabric 5.2. Tectonic Implication Conclusion Acknowledgments References Chapter 79 Actinobacteria from Marine Sediments: Diversity and Secondary Metabolites Abstract 1. Introduction 2. Samples Collection, Isolation and Cultivation of Actinobacteria 2.1. Samples Collection 2.2. Selective Isolation Procedure 2.3. Media for Selective Isolation 3. Identification and Diversity of Actinobacteria 3.1. Identification Techniques 3.2. Diversity of Actinobacteria 4. Secondary Metabolites and Biological Activity of Actinobacteria 4.1. Secondary Metabolites and Biological Activity of Streptomyces 4.2. Secondary Metabolites and Biological Activity of Rare Actinomycetes Conclusion References Chapter 80 Bibliography Chapter 81 Overview of Seaweed By-Products Abstract Introduction Seaweed Composition Major Sources of Seaweeds By-Products Food Industrial Production of Hydrocolloids Production of Fertilizers and Plant Growth Stimulants Algal Blooms and Beach Wrack Valorization and Utilization of Seaweed By-Products and Wastes Separate Utilization of the Constituent Fractions Valorization as a Whole Biofuel Adsorbent Examples of Valorization of Seaweed Wastes Brown Seaweeds Green Seaweeds Red Seaweeds Conclusion References Chapter 82 Algae and Microalgae Biorefinery Abstract Introduction Macroalgae Microalgae Conclusion Acknowledgments References Chapter 83 Potential Uses of Seaweed By-Products in High-Value Products and Materials Abstract Introduction Commercial Applications of Seaweeds Food Products Agriculture Biomaterials Bioactive Compounds Products Derived from Seaweed By-Products Products Obtained by Solvent Extraction Products Obtained Using the Enzymatic Extraction Process Biofuels Biocomposites and Composite Materials Challenges References Chapter 84 Color Stability and Pigment Contents of Powdered Laver (Pyropia yezoensis) Abstract 1. Introduction 2. Materials and Methods 2.1. Materials 2.2. Preparation and Storage of Powdered Laver 2.3. Color Analysis of Powdered Laver 2.4. Measurement of the Amount of Chlorophyll 2.5. Measurement of Pheophytin Content 2.6. Measurement of Carotenoid Levels 2.7. Analysis of Phycobiliproteins 3. Results and Discussion 3.1. Effect of Relative Humidity on Color Stability and Pigment Levels 3.2. Temperature Dependence of Color Stability and Pigment Levels Conclusion Acknowledgment References Chapter 85 Understanding the Interactions of Sargassum muticum with Metals as a Starting Point for the Valorisation of Invasive Seaweed Species Abstract Introduction Methods Pre-Treatment Effect of pH and Ionic Strength Potentiometric Titrations Isotherms and Kinetics Column Studies at Laboratory Scale and Pilot Plants Redox Capacity of the Aqueous Extract: Formation of Nanoparticles Structural and Acid–Base Properties Chemical Composition and Natural Environment Binding Capacity for Metals and Other Species Column Studies at Laboratory Scale and Pilot Plants Redox Capacity of the Aqueous Extract: Synthesis of Nanoparticles The Sorbigal Project Conclusion References Chapter 86 New Insights into Seaweeds on Nutrition and Functionality Abstract Introduction Seaweeds as Functional Food Sources Seaweeds as Emergent Sources of Prebiotics Fucoidan as Anticancer Agent in Preclinical Development Prevention of Syndrome Metabolic by Fucoxanthine Prevention of Obesity through Alginate Mediated by Enzyme Digestion Inhibition Phlorotannins as Promising Functional Ingredient Fucosterol Still Needs to Reinvent Itself Sulphated Polysaccharides as Inhibitors of Calcium Oxalate Renal Stone Formation Algae Ingredients as Antimicrobials Innovative Extraction Technology of Algal Biomass Conclusion References Chapter 87 Microalgae Biomass as a Food Ingredient to Design Added Value Products Abstract 1. Introduction 1.1. What Are Microalgae? 1.2. New Trends in Microalgae Food Applications 2. Microalgae Pre-Treatment 2.1. Cell Disruption Methods 2.2. Impact of Cell Disruption on Rheological Properties of Wheat Bread with Chlorella vulgaris Incorporation 2.2.1. Morphological Changes on the Cells 2.2.2. Impact on Rheological and Colour Properties of Wheat Doughs and Breads 2.2.3. Impact on the Bread Antioxidant Capacity 3. Impact of Processing on the Microalgae Performance as a Food Ingredient 3.1. Antioxidant Activity Microalgae Biomass on Food Emulsions 3.2. Incorporation of Microalgae as a Source of Omega-3 Polyunsaturated Fatty Acids in Pasta Products 3.3. Gelled Desserts Enriched with Microalgae 3.4. Bioactive Cookies 3.5. Bioaccessibility of Microalgae Biomass Conclusion Acknowledgments References Chapter 88 Seaweed By-Products for Food and Bioremediation 1. Introduction 2. Seaweed Biomass and By-Products for Biomonitoring and Bioremediation 2.1. Seaweeds as Bioindicators 2.2. Seaweeds By-Products for Bioremediation 3. Seaweed Biomass for Feeding Fish and Bioremediation in Integrated Aqua Culture Systems 3.1. Seaweeds as a Sustainable and Functional Aquafeed Ingredient 3.2. Seaweeds Biomass for Bioremediation in Integrated Aquaculture Systems Conclusion Acknowledgment References Chapter 89 Ethanol and Macro Algae: Where to Next? Abstract Introduction Algae Blooms Species and Production Cultivation System Bottleneck Processing and Fermentation of Macroalgae Biomass Seaweed Polysaccharides for Bioethanol Production Ethanol Production Pretreatment Hydrolysis Enzymatic Hydrolysis Fermentation Conclusion References Chapter 90 The Brook Lamprey (Lampetra planeri) and Ukrainian Lamprey (Eudontomyzon mariae) in the Czech Republic: General Biology, Ecology, Distribution and Status with Recommendation for Conservation Abstract 1. Introduction 2. Results 2.1. Lamprey Population Monitoring 2.2. Growth of Larvae and Population Structure of the Brook Lamprey Population 2.3. Habitat Selection by Lampreys and Food of Ammocoetes 2.4. Breeding 2.5. Metamorphosis 2.6. Bioindication by Lampreys 2.7. Occurrence of Lampreys 2.7.1. Lampetra planeri 2.7.2. Eudontomyzon mariae 2.8. Main Threats to Lampreys and Their Conservation and Management Acknowledgments References Chapter 91 Lamprey Blood Clotting: A 60-Year Journey from Field Work to Genomics Abstract Introduction Catching Lampreys Bleeding Lampreys Blood Clotting in Mammals Nomenclature of Clotting Factors Back to Lampreys Species Specificity Identifying the Less Abundant Clotting Factors Domain Shuffling Bioinformatics Lamprey Clotting and the 2R Hypothesis Fibrin Clots Pre-Date Lampreys Afterthoughts References Chapter 92 Morphometric and Meristic Variability in Lampreys of the Genus Lethenteron (Petromyzontida: Petromyzontiformes) in Sakhalin Island Rivers Abstract Abbreviations 1. Material and Methods 2. Taxonomic Notes 3. Results and Discussion 3.1. Larvae 3.2. Adults Conclusion Acknowledgments References Chapter 93 Biology of Common Carp in Natural and Farmed Habitats from a Global Perspective Abstract Introduction Origin, Habitats and Distribution Growth and Production Length–Weight Relationship and Condition Factors Food Habit Spawning, Maturation and Fecundity Behavior References Chapter 94 Assessing the Effectiveness of Controlled Reproduction of the Common Carp from 16 Breeding Lines Abstract Introduction Material and Methods Results Female Ovulation after Ovopel Treatment The Effect of the Origin of Females on the Weight, Quality and Total Number of Eggs and the Number of Living Embryos after 36 h Incubation The Effect of Female Age on the Weight, Quality and Total Number of Eggs and the Number of Living Embryos after 36 h Incubation Regression Predictions Summary Conclusion Acknowledgments References Chapter 95 Utilisation of Natural Food Resources by Carp in Fish Ponds Abstract Introduction The Changing Role of Natural Food Resources in Central European Carp Farming A Short History Natural Food Resources in Carp Diet The Role of Natural Food Resources in Carp Diet Natural Food Resources and Carp Nutrition Summarising Carp Impact on Zooplankton and Zoobenthos Assemblages under Extensive Conditions Present Pond Management Practice and Production of Natural Food Use of Manure and Lime for Increasing Natural Food Availability Supplementary Feeding and Its Impact on Natural Food Utilisation Acknowledgments References Chapter 96 Zooplankton Ecology in Common Carp Ponds Abstract Introduction Interactions Zooplankton-Carp Zooplankton as Food for Carp Influence of Pond Management on Zooplankton Ecology Fish Stock Density and Biomass Supplementary Feeding Fertilization Zooplankton Succession in Carp Ponds Other Interactions Predation of Copepods on Carp Juveniles Zooplankton as Parasites and Disease Vector Interactions Zooplankton-Environment Impact of Zooplankton on Pond Ecosystem Health Zooplankton Organisms and Pond Water Quality Influence of Bioturbation Conclusion Acknowledgments References Chapter 97 Heavy Metals and Microelements Content in Common Carp Abstract Introduction Materials and Methods Study Area and Sample Collection Sample Preparation Statistical Analysis Results and Discussion Target Organs for Bioaccumulation of Heavy Metals and Microelements in Common Carp Sampling Sites Variations of Bioaccumulation of Heavy Metals and Microelements in Common Carp Species-Specific Differences in the Bioaccumulation of Heavy Metals and Microelements Ecosystems Variations of Accumulations of Heavy Metals in Common Carp Conclusion Acknowledgments References Chapter 98 Factors Affecting the Meat Quality of Common Carp Abstract Introduction The Significance of Fish in the Human Nutrition Factors Affecting Changes in the Chemical and Fatty Acid Composition of Meat of Common Carp Chemical Composition of the Fillets of Various Fish Species Effects of Diet on the Chemical Composition of Common Carp Effects of Good Production Technology and Appropriate Structure of Planktonic and Benthic Organisms on Chemical and Fatty Acid Composition of Common Carp Effects of Formulated Feed Mixtures on Fish Health, Production Parameters and Meat Quality Effects of Age, Sex and Genetic Factors on the Chemical Composition of Fish Meat Age Sex and Sexual Maturity Conclusion Acknowledgments References Chapter 99 Diseases of Common Carp and Their Control Measures Abstract Introduction Saprolegniasis Causative Agents Disease Signs Management and Control Branchyomycosis Causative Agent Disease Signs Management and Control Erythrodermatitis Causative Agents Disease Signs Management and Control Columnaris Disease Causative Agent Disease Signs Management and Control Bacterial Gill Disease Causative Agent Disease Signs Management and Control Mycobacteriosis Causative Agent Disease Signs Management and Control Spring Viraemia of Carp (SVC) Causative Agent Disease Signs Management and Control Carp Pox Causative Agent Disease Signs Management and Control Koi Herpes Virus Disease (KHV) Causative Agent Disease Signs Costiasis Causative Agents Disease Signs Management and Control Coccidiosis Causative Agents Disease Signs Management and Control Ich (White Spot Disease) Causative Agent Disease Signs Management and Control Chilodonellosis Causative Agent Disease Signs Management and Control Trichodiniasis Causative Agent Disease Signs Management and Control Myxobolosis Causative Agent Disease Signs Management and Control Dactylogyrosis Causative Agents Disease Signs Management and Control Gyrodactylosis Causative Agents Disease Signs Management and Control Causative Agents Disease Signs Management and Control Phosthodiplostomosis Causative Agent Disease Signs Management and Control Sanguinicoliasis Causative Agents Disease Signs Management and Control Ligulosis Causative Agent Disease Signs Management and Control Bothriocephalosis Causative Agent Disease Signs Management and Control Khawiosis Causative Agents Disease Signs Management and Control Nematode Infestation Causative Agents Disease Signs Management and Control Phylometrosis Causative Agent Disease Signs Management and Control Fish Leech Infestation Causative Agent Disease Signs Management and Control Ergasilosis Causative Agents Disease Signs Management and Control Lernaeosis Causative Agents Disease Signs Management and Control Argulosis Causative Agents Disease Signs Management and Control References Chapter 100 Blooms Caused by the Diatom Cylindrotheca closterium along the Northern Coast of Yucatan, Southeastern Gulf of Mexico (2001-2014) Abstract Introduction Material and Methods Results Discussion Conclusion Acknowledgments References Chapter 101 Phytoplankton Chlorophyll-( Concentration Associated with Hydrographic Conditions on the Continental Shelf in the Southern Gulf of Mexico Abstract Introduction Material and Methods Results Regional Hydrographic Conditions Chlorophyll-a Distribution Discussion Acknowledgments References Chapter 102 Molecular Identification of Thunnus Species Abstract Introduction Review of the Molecular Identification History of Thunnus Tunas Since the 1990s Thunnus Species Identification Sequencing PCR-RFLP Real-Time PCR Other Techniques Phylogenetic Studies Allozyme Locus Analysis Gene Sequence Analysis Population Genetics Studies Thunnus albacares (Yellowfin Tuna) Thunnus alalunga (Albacore) Thunnus obesus (Bigeye) Thunnus orientalis (Pacific Bluefin Tuna) Thunnus thynnus (Atlantic North Bluefin Tuna) Thunnus maccoyii (Southern Bluefin Tuna) Conclusion References Chapter 103 Marine Bacteria with Strong Survivability toward Tributyltin Abstract Tributyltin in a Marine Environment Biodiversity of TBT-Resistant Marine Bacteria Importance of Marine Bacterial Cell Walls to Protect against the Inflow of TBT Existence of Environmental Bacteria Possessing Congenital TBT Tolerance Estimation of the Impact of TBT-Resistant Marine Bacteria in TBT-Polluted Surface Sediment Bioremediation of TBT-Contaminated Sediments by TBT-Degradable Marine Bacteria References Biographical Sketch Chapter 104 The Strait of Hormuz: Characteristics, Challenges and Opportunities in the Northern Coastline Abstract 1. Geography and Geomorphology of the Strait of Hormuz 2. Living Marine Resources 2.1. Coral Reefs 2.2. Mangrove Forests 2.3. Planktonic Assemblages 2.4. Bony Fish and Elasmobranches 2.5. Macrobenthos 3. Changing Environmental Conditions 4. Pollution 5. Coastal Ecotourism Potentials 5.1. Mangrove Forests 5.2. Marine Wildlife Watching Acknowledgment References Chapter 105 Macroalgal Polyphenols: Isolation, Characterization and Bioactivity Abstract 1. Introduction 1.1. The Classes of Marine Algae and Their Bioactive Compounds 1.2. The Diversity of Phenolic Compounds Derived from Macroalgae 2. The Analysis of Phenolic Compounds 2.1. The Extraction and Characterization of Polyphenols in Macroalgae 2.1.1. Conventional Polyphenol Extraction Methods 2.1.2. Novel Extraction Methods for the Isolation of Polyphenols Supercritical CO2 Extraction (SC-CO2) Ultrasound-Assisted Extraction (UAE) Subcritical Water Extraction (SWE) Microwave-Assisted Extraction (MAE) 2.2. The Analysis of Phenolic Compounds 2.3. Phlorotannins as Biologically Active Agents Conclusion Acknowledgments References Chapter 106 The Identification, Characteristic Feature and Role of Burrow (Neoichnological) Structure in Bioturbation Activities of Ocypodoid and Grapsoid Crabs of Pakistan Abstract 1. Introduction 2. Bioturbation Role and Ecological Significance of Burrows and Burrowing 3. Environmental Factors Affecting on Burrow Density and Distribution 4. Role of Substratum in Microhabitat Specification 4.1. Organic Matter 4.2. Grain Size Composition 5. Relationship between Density of Crabs and Crab Burrows 6. Relationship of Carapace Length and Burrow Diameter 7. Inter and Intra-Specific Variations in Burrow Architecture 8. Sematectonic Communication through Allied Landmark and Structures Near Burrows 9. Anthropogenic Effects on Burrow and Burrowing References Chapter 107 Estimating Intrinsic Optimum Temperatures and Lower and Upper Thermal Thresholds for the Development of American Lobster Larvae Using a Thermodynamic Model Abstract 1. Introduction 2. Materials and Methods 2.1. Sources of Development Data 2.2. Estimating SSI Model Parameters 2.3. Calculating Bootstrap Confidence Intervals of Parameter Estimates 2.4. Comparisons of Estimates among Larval Stages and Studies 2.5. Combined Analyses Using All Studies’ Data 3. Results 3.1. Overall Findings 3.2. Comparisons among Larval Stages for Each Study 3.3. Comparisons among Studies for Each Larval Stage 3.4. Results for All Datasets Combined 4. Discussion 4.1. Variability and Issues among Estimates Based on Different Source Studies’ Data 4.2. Interpretation and Implications of Estimates Based on All Studies’ Data Combined 4.3. Findings Relevant to SSI Model Fitting Procedures 4.4. Need for New Rearing Studies to be Analyzed with the SSI Model Conclusion Acknowledgments References Chapter 108 The Cryptic Homarus gammarus (L., 1758) Juveniles: A Comparative Approach to the Mystery of Their Whereabouts Abstract 1. Introduction 2. Methods 3. Results 3.1. Overall Comparisons among Decapods 3.2. Morphology 3.3. Life History 3.4. Biotope 3.5. Behavior 4. Discussion: The Full Picture Acknowledgments References Biographical Sketches Chapter 109 Biologic and Socioeconomic Harvesting Strategies for the Caribbean Spiny Lobster Fisheries Abstract 1. Introduction 2. Materials and Methods 2.1. Data, Models, and Analyses 2.2. The Simulations 2.3. Theoretical Statement 3. Results 3.1. Optimum Yields 3.2. Optimum Economic Yields 3.3. Social Benefits 4. Discussion 4.1. The Model Output 4.2. Management Options Conclusion Acknowledgments References Chapter 110 Marine Debris: Interagency Committee Members Are Taking Action, but Additional Steps Could Enhance the Federal Response( Why GAO Did This Study What GAO Recommends What GAO Found Abbreviations Background Marine Debris Act Interagency Committee Coordinates through Meetings, but NOAA Does Not Have a Process for Determining Committee Membership and Agency Representation Interagency Committee Holds Quarterly Meetings to Share Information about Individual Agency Activities Such as Education and Outreach NOAA Has Not Established a Process for Determining Interagency Committee Membership and Agency Representation Interagency Committee’s Reports Do Not Contain Some Required Elements Implementation of Recommendations and Analysis of Effectiveness Estimated Funding and Recommendations for Priority Funding Needs Experts Suggested a Range of Actions the Federal Government Could Take to Most Effectively Address Marine Debris Education and Outreach Establishment of Federal Requirements or Incentives Cleanup Research and Technology Development Coordination Conclusion Recommendations for Executive Action Agency Comments and Our Evaluation List of Requesters Appendix I: Objectives, Scope, and Methodology Appendix II: Recommendations from the Interagency Marine Debris Coordinating Committee’s 2008 Report Appendix III: Examples of Interagency Marine Debris Coordinating Committee Member Agencies’ Activities Education and Outreach Legislation, Regulation, and Policy Cleanup Research and Technology Development Coordination Appendix IV: Comments from the Department of Commerce Appendix V: Comments from the U.S. Agency for International Development Chapter 111 The Effects of Marine Debris on Beach Recreation and Regional Economies in Four Coastal Communities: A Regional Pilot Study* Executive Summary Study Design Survey Results Recreational Value Regional Economic Impacts 1. Introduction 1.1. Marine Debris Survey 1.2. Nationwide Recreation Model 1.3. Regional Economic Impact Analysis 2. The Marine Debris Survey 2.1. Survey Design 2.1.1. Onsite and Mail Survey Pretest 2.1.2. Onsite Survey – Regional Pilot 2.1.3. Mail Survey – Regional Pilot 2.2. Survey Implementation 2.2.1. Survey Schedule and Response Rates 2.2.2. Onsite Sampling Procedures Alabama Delaware/Maryland Ohio Orange County, California 2.2.3. Sample Statistics 2.3. Development of Sampling Weights 2.3.1. Base Weights 2.3.2. Reweighting Mail Respondents 2.4. Results of the Marine Debris Survey 2.4.1. Population Statistics 2.4.2. Effects of Marine Debris on Recreation Trips 3. Recreational Value Model 3.1. Nationwide Recreation Model 3.1.1. Nationwide Coastal Recreation Data 3.1.2. Model Structure 3.1.3. Estimated Model Parameters 3.2. Comparisons to External Sources 3.2.1. Effects of Debris on Recreation 3.2.2. Seasonal Consistency 3.2.3. Debris Ratings 3.2.4. Benefit Function Transfer 3.3. Caveats and Uncertainties 3.4. Effects of Marine Debris on Recreation Value 4. Regional Economic Impacts Model 4.1. Trip Expenditures 4.2. Economic Impacts of Coastal Recreation 4.3. Regional Economic Impacts of Marine Debris 4.4. Caveats and Uncertainties 5. Summary of Results References Appendix A: Example Surveys Beach Recreation Survey - Alabama Garbage or Manmade Debris You May See on Beaches Beach Recreation Survey – Delaware and Maryland Garbage or Manmade Debris You May See on Beaches Beach Recreation Survey – Lake Erie, Ohio Garbage or Manmade Debris You May See on Beaches Beach Recreation Survey – Orange County, California Garbage or Manmade Debris You May See on Beaches Appendix B: Mail Survey Summary Statistics Appendix C: Methods for Reweighting Mail Respondents Adjusting Sampling Weights Using Key Variables Appendix D: Detailed Methods of Economic Impacts Model D.1. Converting Visitor Spending into Producer Value D.2. Expenditure and Multiplier Tables Chapter 112 Great Lakes Land-Based Marine Debris Action Plan Accomplishments Report( List of Acronyms Introduction Action Plan Purpose Action Plan Status Marine Debris Goals, Objectives and Actions Goals Objectives Actions Vision Mission Goal 1. Research and Monitoring Action Status Goal Accomplishments Great Lakes Marine Debris Collaborative Portal (Objective 1.1) Convened Researchers to Foster Collaboration (Objective 1.2) Completed a Research Summary and Gap Analysis (Objective 1.3) Management Community Connections (Objective 1.4) Goal 2. Science-Based Approaches and Management Action Status Goal Accomplishments Summary of Existing Marine Debris Policies (Objective 2.1) Dissemination of Action Plan to Policy and Management Officials (Objective 2.2, Actions 2.2.1 and 2.2.2) Goal 3. Prevention and Education Action Status Goal Accomplishments Education Needs Assessment (Objective 3.1) Awareness Campaign in Cleveland, OH (Objective 3.2) Outreach Highlights Goal 4. Removal and Tracking Action Status Goal Accomplishments Bi-Nationally Remove Marine Debris (Objective 4.1) Best Management Practices for Removing and Preventing Debris (Objective 4.2) Chapter 113 Statement of Anne Kinsinger, Associate Director for Ecosystems( Role of the U.S. Geological Survey USGS Capabilities Chapter 114 Statement of Stephen Guertin, Deputy Director U.S. Fish and Wildlife Service, Department of the Interior( Marine Debris Overview Plastics and Microplastics Derelict Fishing Gear Abandoned and Derelict Vessels Examples from across the National Wildlife Refuge System Northwestern Hawaiian Islands and Midway Atoll National Wildlife Refuges Maine Coastal Island National Wildlife Refuge Complex Florida Keys National Wildlife Refuge Complex Conclusion Chapter 115 Testimony of Christy Leavitt, Campaign Director, Oceana( Oceans Are Critical to Life on Earth Plastic Pollution is a Growing Problem for Ocean Health Solution: Reduce Plastic Pollution at the Source Governments Play a Critical Role in Reducing Plastic Pollution Chapter 116 Written Testimony of Linsey E. Haram, Research Ecologist, Smithsonian Environmental Research Center( Introduction Plastic Marine Debris Floating Plastics as Vectors for Invasive Species Current Research and Collaborations 1. Ecological Community Surveys 2. Large Floating Debris Movement 3. Marine Invertebrate Colonization of New Debris 4. Education and Outreach Conclusion Chapter 117 Written Testimony of Dr. Chelsea Rochman, House Appropriations Subcommittee on Interior, Environment and Related Agencies Hearing on Ecosystem Impacts of Marine Debris/Ocean Plastic Pollution( Microplastics Macroplastics Chapter 118 Mussels as Sentinel Organisms in Metal and Metalloid Contamination Scenarios: Environmental and Public Health Risk Bioindicators Abstract 1. Introduction 2. Metal and Metalloid Toxicity 3. Mussels as Bioindicators Concerning Environmental Metal and Metalloid Contamination 4. Subcellular and Molecular Effects of Metal and Metalloid Exposure: Reactive Oxygen Species and Oxidative Stress 5. Mussel Biomarker Responses against Metal - and Metalloid-Induced Oxidative Stress 6. Mussel Responses to Nanoparticle Exposure 7. Necessary Considerations When Applying Mussels as Bioindicators for Metal and Metalloid Exposure in Aquatic Ecosystems 8. Mussels and Public Health Conclusion References Chapter 119 Mussel Shells’ Thermal Valorisation and Odour Emissions Abstract 1. Introduction 1.1. Odour Management 2. Case Study 3. Methodology 3.1. Greening the Process 3.2. Olfactometric Analysis 3.2.1. Qualitative Analysis 3.2.2. Quantitative Analysis 3.2.3. Immission Analysis 3.3. Results 3.3.1. Detection of Improvable Flows 3.3.2. Identification of Solutions 3.3.2.1. Reception and Storage of Raw Materials 3.3.2.2. Thermal Treatment 3.3.2.3. Final Product Management 3.3.2.4. Waste Water Treatment Plant (WWTP) Conclusion References Chapter 120 Determination of Emerging Metal Pollutants and Toxic Metals in Mussels and Bivalve Mollusks, Very Important Food and Environmental Bio-Monitoring Species Abstract Experimental Reagents, Reference Solutions, and Standard Reference Materials Sampling Area and Sampling Sites Sample Preparation before the Instrumental Determination Voltammetric Procedure Spectroscopic Procedure Limits of Detection Metals of Interest Copper, Lead, Cadmium and Zinc Mercury Arsenic and Selenium Tin and Antimony Nickel and Cobalt Chromium Bismuth Vanadium Platinum Group Metals (PGMs) Determination of PGMs, Part I: Pt(II), Pd(II) and Rh(III) Determination of PGMs, Part II: Os(VIII), Ru(III) and Ir(III) Thallium Analytical Procedure for the Voltammetric Determination of Tl(I) Results and Discussion Limits of Detection and Linear Range Quality Control and Quality Assessment Practical Application Bio-Remediation Conflict of Interest References Chapter 121 Hemocytes of the Ribbed Mussel Aulacomya atra atra from Nuevo Gulf (Chubut) as Biomarkers of Oxidative Stress Abstract Introduction Objective Materials and Methods Zones Selected Animal Collection Flow Cytometry Studies Superoxide Anion Production DCFH-DA Oxidation Rate Content of Thiobarbituric Acid Reactive Substances (TBARS) Quantification of Lipid Radicals by Electron Paramagnetic Resonance (EPR)-Spin Trapping Cardiolipin Content Statistical Analyses Results Discussion Acknowledgments References Biographical Sketches Chapter 122 Biomarker Responses in Bivalves Affected by Environmental Stressors Associated with the Global Climate Change Abstract Introduction Acidification Seasonality Temperature Salinity Oxygen Partial Pressure (pO2) Biotoxins Conclusion Acknowledgments References Biographical Sketches Chapter 123 The Effects of Ascorbic Acid on Lipid Oxidation during the Processing of Mytilus edulis chilensis in the Beagle Channel (Tierra del Fuego) Abstract Introduction Materials and Methods Experimental Design Physico-Chemical Determination in the Sampling Area TBARS Content Lipid Soluble Antioxidants Content Ascorbyl Radical Content (A•) Ascorbate Content (AH-) Statistical Analyses Results Discussion Acknowledgments References Chapter 124 A Sea of Problems: Impacts of Plastic Pollution on Oceans and Wildlife( Statement of the Hon. S. Alan Lowenthal, Representative in Congress from the State of California Prepared Statement of the Hon. Alan S. Lowenthal, Representative in Congress from the State of California Statement of the Hon. Tom Mcclintock, Representative in Congress from the State of California Prepared Statement of the Hon. Tom Mcclintock, Ranking Member, Subcommittee on Water, Oceans, and Wildlife Statement of Ted Danson, Actor, Advocate, and Board Member, Oceana, Los Angeles, California Prepared Statement of Ted Danson, Vice Chair, Oceana Board of Directors, Los Angeles, California Questions Submitted for the Record by Rep. Velázquez to Ted Danson Statement of Juan Parras, Founder, Executive Director, Texas Environmental Justice Advocacy Services (TEJAS), Houston, Texas Prepared Statement of Juan Parras, Executive Director, Texas Environmental Justice Advocacy Services (T.E.J.A.S.) Questions Submitted for the Record to Mr. Juan Parras Question Submitted by Rep. Lowenthal Question Submitted by Rep. Velázquez Question Submitted by Rep. Cox Statement of Dr. Jenna Jambeck, Professor of Environmental Engineering, University of Georgia, Athens, Georgia Prepared Statement of Jenna R. Jambeck, PhD, Professor of Environmental Engineering, College of Engineering, University of Georgia, Athens, Georgia; National Geographic Fellow Key Points Introduction Context Introduction Impacts from Plastic Marine Debris Input into the Ocean from Mismanaged Plastic Waste Import-Export of Plastic Waste It’s a Global Issue Interventions and Mitigation Strategies 1. Reducing Plastic Production 2. Innovative Materials and Product Design 3. Reduce Waste Generation 4. Improve Waste Management Globally 5. Litter Capture Community-Based Data Collection and Assessment The U.S. Can Be a Global Leader in Addressing This Issue Summary Questions Submitted for the Record to Jenna R. Jambeck, PhD Professor of Environmental Engineering, College of Engineering, University of Georgia Questions from Rep. Alan Lowenthal Questions from Rep. Nydia M. Velazquez Questions Submitted by Rep. Cox Statement of Tony Radoszewski, President and CEO, Plastics Industry Association, Washington, DC Prepared Statement of Tony Radoszewski, President and CEO, Plastics Industry Association Questions Submitted for the Record by Rep. Mcclintock to Mr. Tony Radoszewski, Plastics Industry Association Sustainable Packaging Government Response Possible Solutions Submission for the Record by Rep. Lowenthal Regional Partners/Zips Using Sound Science to Inform Policy Multi-Pronged, Innovative Approaches Submission for the Record by Rep. Lowenthal, Strategies to Reduce the Global Carbon Footprint of Plastics Online Content References Acknowledgments Author Contributions Competing Interests Additional Information Chapter 125 Cleaning Up the Oceans: How to Reduce the Impact of Man-Made Trash on the Environment, Wildlife, and Human Health( Opening Statement of Hon. John Barrasso, U.S. Senator from the State of Wyoming Opening Statement of Hon. Thomas R. Carper, U.S. Senator from the State of Delaware Opening Statement of Hon. Dan Sullivan, U.S. Senator from the State of Alaska Opening Statement of Hon. Sheldon Whitehouse, U.S. Senator from the State of Rhode Island Dooley to Remain at ACC through the End of 2019 Statement of Jonathan Baillie, Executive Vice President and Chief Scientist, National Geographic Society Written Testimony of Dr. Jonathan Baillie, Executive Vice President and Chief Scientist National Geographic Society, before the United States Senate Committee on Environment and Public Works “Cleaning Up the Oceans: How to Reduce the Impact of Man-Mad... Plastics: A Global Crisis Impact of Plastic Debris on Marine Wildlife Impact of Plastic Debris on Humans My Background on the Issue Planet or Plastic? Investing in Change Stopping Plastic Pollution at Its Source Improving Plastics Waste Management Cleaning Up Plastic Fishing Gear Pollution Partnership for Change An Opportunity for U.S. Leadership U.S. Plastic Waste Model Nation and Innovation Appendix World Map Display of Plastic Waste in Oceans via National Geographic Recent Editorial Co-Authored by Jonathan Baillie Senate Committee on Environment and Public Works, Hearing Entitled, “Cleaning Up the Oceans: How to Reduce the Impact of Man-Made Trash on the Environment, Wildlife, and Human Health?”, September 26, 2018 Chairman Barrasso Ranking Member Carper Senator Markey Senator Merkley Senator Whitehouse Statement of Hon. Cal Dooley, President and CEO, American Chemistry Council American Chemistry Council, Statement for the Record, Senate Committee on Environment and Public Works, “Cleaning Up the Oceans: How to Reduce the Impact of Man-Made Trash on the Environment, Wildlife, and Human Health,” September 26, 2018 Senate Committee on Environment and Public Works, Hearing Entitled, "Cleaning Up the Oceans: How to Reduce the Impact of Man-Made Trash on the Environment, Wildlife, and Human Health?", September 26, 2018, Questions for the Record for the Honorable Ca... Chairman Barrasso Circulate Capital Asia Pacific Economic Cooperation (APEC) Ranking Member Carper Education of Consumers Investment in Technology and Infrastructure Senator Whitehouse Save the Bay Narragansett Bay, Rhode Island Keep It Beachy Clean (Virginia Beach) Circulate Capital Statement of Bruce Karas, President of Environment and Sustainability, Coca-Cola North America Testimony of Bruce Karas, Vice President of Environment and Sustainability, the Coca-Cola Company North America, before the United States Senate, Environment and Public Works Committee, Hearing on Marine Debris, September 26, 2018 Design Collect Partner Senate Committee on Environment and Public Works, Hearing Entitled, "Cleaning Up the Oceans: How to Reduce the Impact of Man-Made Trash on the Environment, Wildlife, and Human Health?", September 26, 2018, Questions for the Record for Mr. Bruce Karas Chairman Barrasso China Indonesia Philippines Thailand Vietnam Ranking Member Carper Senator Markey Senator Merkley Senator Whitehouse Statement of Kara Lavender Law, Research Professor of Oceanography, Sea Education Association Written Testimony of: Kara Lavender Law, PhD, Research Professor of Oceanography, Sea Education Association, Woods Hole, Massachusetts, before the U.S. Senate Committee on Environment and Public Works, Hearing: “Cleaning Up the Oceans: How to Reduce t... Introduction Plastics: Ubiquitous, Long-Lived and Harmful to Wildlife Identifying the Sources From Sources to Solutions Contain the Waste Clean Up Uncontained Waste Sustainable Solutions Concluding Remarks Senate Committee on Environment and Public Works, Hearing Entitled, "Cleaning Up the Oceans: How to Reduce the Impact of Man-Made Trash on the Environment, Wildlife, and Human Health?", September 26, 2018, Questions for the Record for Dr. Kara Lavende... Chairman Barrasso Ranking Member Carper Senator Markey Senator Merley Senator Whitehouse G7 Innovation Challenge to Address Marine Plastic Litter Examples of Implementation Mechanisms Plastic Pollution Is Now Spreading from Ocean Food Chains into Land Animals, Thanks to This Insect Statement for the Record, of the September 26, 2018, Senate Committee on Environment and Public Works Public, Public Hearing, on the Subject: "Cleaning Up the Oceans: How to Reduce the Impact of Man-Made Trash on the Environment, Wildlife, and Human H... Microplastics Marine Debris in General Regional Partnerships Using Sound Science to Inform Policy Multi-Pronged, Innovative Approaches Chapter 126 Marine Environment and Contaminations of Radiocesium and Organohalogens in Cetaceans and Pacific Cod Inhabiting the Coastal Waters around Hokkaido, Northern Japan Abstract 1. Sea Areas of Hokkaido 1.1. Introduction to the Sea Areas of Hokkaido 1.2. Sea Currents around Hokkaido, Japan 1.3. Coastal Zone 1.4. Cetaceans and Their Migrations 1.5. Fishes and Their Migrations 1.6. Conclusion 2. Radiocesium Contamination and Migratory Behavior of Cetaceans and Pacific Cods from the Seawaters of Hokkaido 2.1. Introduction 2.2. Contamination of Radiocesium in Stranded Cetaceans on the Coast of Hokkaido 2.3. Contamination of Radiocesium in Pacific Cod Caught Off Hokkaido 2.4. Stable Carbon and Nitrogen Isotope Ratios in Fish and Cetaceans in the Seawater around Hokkaido 2.5. Conclusion 3. Perfluoroalkyl Substances in Cetaceans and Fish from the Seas of Northern Japan 3.1. Introduction 3.2. PFASs in Cetaceans 3.2.1. Stranded Cetacean Samples for PFASs Analysis 3.2.2. Tissue-Specific Accumulation and Species Differences PFOS (C8S) and PFOA (C8A) Long-Chain PFCAs (C9A-C14A) 3.2.3. Congener-Specific Accumulation 3.2.4. Geographical Distribution PFOS (C8S) PFOA (C8A) Long-Chain PFCAs (C9A to C14A) 3.3. PFCAs in Pacific Cods 3.3.1. Profiles and Levels of PFCAs in Hokkaido 3.3.2. Geographical Distribution 3.3.3. PFCAs in the Food Chain 3.4. Conclusion 4. Anthropogenic Organohalogens in Cetaceans and Fish from Northern Japan 4.1. Introduction 4.2. POPs Contamination in Cetaceans 4.3. POPs Contamination in Pacific Cod 4.4. Conclusion 5. Contamination of Naturally Produced Organohalogens in Northern Japan 5.1. Introduction 5.2. Profiles and Levels of NHCs in Hokkaido Br4Cl2-DBP Cl7-MBP MeO-BDEs 5.3. Comparisons between Natural and Anthropogenic Compounds PFCAs and NHCs PCBs and NHCs 5.4. Conclusion References Chapter 127 Comparative Study of Histopathological and Biochemical Biomarkers of Two Black Sea Marine Fish Species, Belonging to Different Ecological Groups Abstract Introduction Materials and Methods Biological Characteristics of Tested Fish Species Sample Preparation for Histochemical Studies Sample Preparation for Biochemical Studies and Antioxidants Assay Statistical Analysis Results Hystopathological Characteristics of Fish Liver and Spleen Scorpion Fish Antioxidant System of the Fish Species Discussion Conclusion References Chapter 128 Design of IoT-Cloud Marine Knowledge System Based on Open Source Abstract 1. Introduction 2. Marine Knowledge System 2.1. Proposal System Concept 2.1.1. Marine μBox (MB) 2.1.2. Marine IoT-Cloud Hub 2.1.3. Red Tide Prediction Server 2.2. Test of Designed Marine Knowledge System Conclusion References Chapter 129 Methods of Determination of Micropollutants in Different Marine Matrices Abstract 1. Introduction 2. The Organic Pollutants 2.1. Organochlorine Pesticides (OCPs) 2.2. Synthetic Musks 2.3. Triazole Pesticides 3. Detection Techniques for Organic Pollutants 3.1. Gas Chromatography 3.2. High Performance Liquid Chromatography 3.3. High Performance Liquid Chromatography Coupled to Mass Spectrometry Detector and Quadrupole Time of Flight Analyzer (HPLC-MS-QTOF) 3.3.1. Mass Spectrometer 3.3.1.1. Ionization Source: Electrospray Ionization Source (ESI) 3.3.1.2. Electrospray History 3.3.1.3. Desolvation/Ionization Mechanism 3.3.1.4. Electro-Nebulization of Liquid under Influence of an Electric Field 3.3.1.5. Factors Influencing Ionization 3.3.2. QTOF Analyser 4. Extraction Techniques of Organic Pollutants 4.1. Soxhlet Extractor 4.1.1. The Advantages and Disadvantages of Soxhle Extraction 4.1.2. Example of Study 1: Distribution of Organochlorine Pesticides in Sediment Cores from the Bizerte Lagoon (Tunisia) (Necibi et al. 2019) 4.1.3. Example of Study 2: Distribution of Organochlorine Pesticides in Suspended Particulate Matter and Sediment from the Bizerte Lagoon, Tunisia (Necibi et al. 2019) 4.1.3.1. Residual Levels of OCPs in SPM 4.1.3.2. Residual Levels of OCPs in Sediment 4.2. Liquid-Liquid Extraction (LLE) 4.2.1. The Advantages and Disadvantages of Liquid-Liquid Extraction 4.2.2. Example of Study: Distribution and Partitioning of Aliphatic Hydrocarbons and Polycyclic Aromatic Hydrocarbons between Water, Suspended Particulate Matter, and Sediment in the Harbours of the West Coast of the Gulf of Tunis (Tunisia) (Mzoughi e... 4.3. QuEChERS Extraction Method 4.3.1. The Advantages of Extraction with QuEChERS 4.3.2. Example of Study 1: Determination of Synthetic Musks in Surface Sediment from the Bizerte Lagoon by QuEChERs Extraction Followed by GC-MS (Necibi et al. 2016) 4.4. Solid Phase Extraction (SPE) 4.4.1. Definition of SPE 4.4.2. SPE Protocol 4.4.3. Example of Study 1: Response Surface Methodology Approach for the Preparation of a Molecularly Imprinted Polymer for Solid Phase Extraction of Fenoxycarb Pesticide in Mussels (Atayat et al. 2019) 5. Detection Techniques of Inorganic Pollutants 5.1. Heavy Metal 5.2. Atomic Absorption Spectrometry 5.2.1. Example of Study 1: Assessment of Heavy Metals in Sediment and in Suspended Particles Affected by Multiple Anthropogenic Contributions in Harbors (Chouba et al. 2011). References Biographical Sketch Chapter 130 Organochlorine Pesticides (OCPs) in Coastal Marine Environments: Levels, Fate, Behavior, and Effects on Biota Abstract Introduction Production and Use Management Current Sources to Coastal Environments Environmental Fate and Behavior of OCPs Factor: Nature and Physic-Chemical Properties of OCPs Factor: Environmental Characteristics and Conditions Water Sediment Air Biota Toxicity Wild Animal Toxicity Human Toxicity Current OCP Levels in Coastal Sediments Literature Review and Information Processing Results and Discussion DDTs HCHs Drins Endosulfans Other Organochlorine Pesticides Conclusion References Biographical Sketches Chapter 131 Atmospheric POPs Threat the Marine Environments Abstract Introduction Considerations on the Atmospheric Transport of POPs Oceanic Atmospheric Deposition: Relevance, Control and Implications Oceanic POPs Outgassing Conclusion References Biographical Sketch Chapter 132 Microplastics Pollution: From Continental Sources to Marine Systems Abstract Introduction The Relevance of Microplastics Contribution from Continental Sources Continental MPs Sources Soil Atmosphere Lakes, Rivers and Estuaries Pathways of Continental Microplastics: Environmental Variables and Particles Characteristics Dry and Wet Atmospheric Deposition Precipitation Patterns and Runoff Hydrodynamics Worldwide Continental Influence on Ocean Pollution by MPs Conclusion References Biographical Sketches Chapter 133 Bioindicators of Pollution in Marine Environments Abstract Introduction Nutrient Pollution Bioindicators Metal Pollution Bioindicators Bioindicators of Persistent Organic Pollutants (POPs) Plastic Pollution Bioindicators Bioindicators of Emerging Pollutants (EPs) Acoustic Pollution Bioindicators Conclusion References Biographical Sketch Chapter 134 Occurrence, Behavior and Ecotoxicity of Organophosphorus Pesticides (OPPs) in Marine Environments: A Review Abstract 1. Introduction: History, Chemistry and Uses of Organophosphorus Pesticides 1.1. History and Evolution of Organophosphorus Compounds and Opps 1.2. Chemistry 1.3. Uses of OPPs 1.4. Currently Used OPPs, Quantities and Restricted Compounds 2. Chemical Properties of OPPs and Environmental Behavior 2.1. Physical- Chemical Properties of OPPs: Structures and Related Parameters of 28 Compounds 2.2. OPPs Mechanisms of Degradation and Sorption in Estuaries and Oceans 2.2.1. Hydrolysis 2.2.2. Oxidation 2.2.3. Biodegradation 2.2.4. Photodegradation 2.2.5. Sorption 3. Current OPP Levels in Marine Environments 3.1. OPPs in Marine Sediments 3.2. OPPs in Seawater 4. Organophosphorus Pesticides Toxicity on Non-Target Organisms 4.1 Mode of Action of OPPs 4.2. Bioaccumulation and Bioconcentration of OPPs in Marine Biota 4.3. Common Effects and Toxicity on Marine Biota 4.4. Effects on Human Health Conclusion References Biographical Sketch Chapter 135 Removal of Emerging Organic Pollutants from Seawater Using Photoactivated Persulfate Abstract Introduction Efficiency of SO4●– -Based AOPs in Saline Waters Radicals Distribution in Saline Waters: Kinetics Modeling Data Experimental Efficiency of UV/Persulfate Process in Seawater: CB Degradation Evidence of RCS Implication Role of Bromide Ions Overall Effect of Seawater Salinity Impact of Solution pH and Pollutant Concentration Impact of Surfactants Conclusion References Biographical Sketches Chapter 136 Diversity and Classification of Dinoflagellates Abstract Introduction Basal Dinoflagellates Unarmored Dinoflagellates (Gymnodiniphycidae) Thecate Dinoflagellates (Peridiniphycidae) Prorocentroids and Dinophysoids Gonyaulacales Peridinioids Thin-Walled Dinoflagellates Current Issues Classification References Chapter 137 Photosynthetic Pigments in Dinoflagellates Abstract Introduction Chlorophylls and Carotenoids Described in Dinoflagellates Chlorophylls in Dinoflagellates Carotenoids in Dinoflagellates Chloroplast Pigment Types and Dinoflagellate Taxa Type-1: Peridinin-Containing Type-2: 4-Keto-Acyloxifucoxanthin-Containing Type-3: Acyloxifucoxanthin-Containing Type-4: Fucoxanthin-Containing Type-5: Alloxanthin-Containing Type-6: chl b-Containing Kleptoplasts and Endo/Ectocytobionts from Multiple Origins Linking Pigment and Plastid Diversity Pigment Composition and Habitat Types A Brief Methodology of Pigment Analyses Strategic Utility of Pigments Conclusion Acknowledgments References Chapter 138 Species Assemblies and Seasonal Succession of Dinoflagellates Abstract Introduction Species Assembly Species Do Not Assemble Randomly The Species Pool Functional Traits and Seasonal Succession The Role of Abiotic Factors in Species Assembly Filtering by the Physical Environment Dinoflagellate Adaptive Strategies in Response to the Physical Environment Life-Forms Based on Functional Traits and the Physical Environment Dinoflagellate Assembly Rules Dinoflagellate Species Assembly in Freshwater Lakes Biological Factors Shaping Dinoflagellate Communities Competition Resource Competition Diatom-Dinoflagellate Competition Interference Competition – Alleopathy Dinoflagellate – Cyanobacteria Competition in Lakes Natural Enemies Grazing by Metazoan Zooplankton Predation by Dinoflagellates and Mixotrophy Parasites and Dinoflagellate Dynamics The Role of Life-Cycle Transitions in Seasonal Succession Conclusion References Chapter 139 Culture and Growth of Dinoflagellates Abstract Introduction Brief History of Dinoflagellate Cultures Protocol for Cultures Categories of Cultures Photobioreactors Turbulence: Photobioreactors Isolation of Cells Antibiotics Media for Autotrophs Culturing Mixotrophs Division Rates Monophasic Bayesian Generalized Logistic Model Division Rates (GK) of Cultured Athecate and Thecate Dinoflagellates In Situ Division Rates Division Rates: Cultures Division Rates: Benthic Dinoflagellates Culture Conditions: Division Rates Salinity and Temperature Light Nutrient Phosphate and Nitrate Iron Mixotrophic Cultures Conclusion Acknowledgments References Chapter 140 Growth and Feeding Behaviour of Mixotrophic Dinophysis Species in Laboratory Cultures Abstract 1. Introduction 2. Biogeography of Dinophysis and Phalacroma Species Associated with DSP Events 3. Isolation of Clonal Strains, Growth and Feeding Process 3.1. Importance of the Establishment of Clonal Culture Strains 3.2. Establishment of Dinophysis Cultures 3.3. Growth under Laboratory Conditions 3.4. The Feeding Behavior, Cell Division and Other Biological Observations in Dinophysis 3.5. Observation of the Chloroplasts Sequestration Process by Dinophysis 4. The Simple Food Chain of Cryptophyte/ Mesodinium/Dinophysis Acknowledgments References Chapter 141 Carbon Assimilation: Dinoflagellates Abstract Introduction General Methodology Photosynthetic Rates Photosynthetic Pigments Peridinin and Photoprotection Carbon Assimilation Uptake in Dark Uptake in Light Athecate Dinoflagellates Thecate Dinoflagellates Zooxanthellae Host Factor Irradiance Temperature Nutrients Response to Chemical Perturbation Survival Strategies Conclusion Acknowledgments References Chapter 142 Mixotrophy in Dinoflagellates: Prey Selection, Physiology and Ecological Importance Abstract Introduction A Short Historical Survey of Dinoflagellate Mixotrophy Research Mixotrophy is a Widespread Phenomenon among Dinoflagellates Prey Type, Feeding Mechanisms, Prey Size and Prey Selectivity Prey Types Feeding Mechanisms, Prey Capture and Prey Size Toxin or Mucus Assisted Prey Capture Environmental Controls of Feeding, Growth and Photosynthesis Constitutive Mixotrophs (CMs) Non Constitutive Mixotrophs (NCMs) Species That Harbour Intact Symbionts Species That Harbour “Reduced Endosymbionts” Species That Only Sequester the Chloroplasts Importance of Mixotrophic Dinoflagellates as Grazers in Natural Waters Conclusion Acknowledgments References Chapter 143 Ecophysiology and Bloom Dynamics of Karenia with Emphasis on Karenia brevis in Florida Waters Abstract 1. Introduction 1.1. Karenia and Algal Blooms 1.2. Taxonomy and Distribution 1.3. Toxins and Their Effects 2. Life Cycle, Behavior and Physiology of K. brevis (with Contrasts and Parallels for K. mikimotoi) 2.1. Life History, Diel Cycle and Vertical Migration 2.2. Cell Growth and Its Requisites 3. Bloom Dynamics of K. brevis 3.1. The Karenia Assemblage 3.2. Bloom Frequency, Duration, and Large-Scale Area Coverage 3.3. Bloom Initiation, Growth, Maintenance, and Termination 3.4. Comparison with K. mikimotoi Blooms 3.5. K. brevis Bloom Dynamics and the Life-Form Selection Approach Acknowledgments References Biographical Sketches Chapter 144 Pfiesteria: A Common Estuarine Dinoflagellate with a Colorful Past Abstract Introduction Taxonomy Pfiesteria Life Cycle Geographic Distribution of the PLDs Ecology and Nutrition Impacts Fish Kills Lesions Fish Bioassays and Micropredation Human Health Identification and Characterization of Pfiesteria spp. Toxins Conclusion Acknowledgments References Chapter 145 Karlodinium veneficum: Still Blooming and Toxic Sixty-Two Years Later Abstract Introduction Characterization of Gymnodinium (Karlodinium) veneficum PLY103 Pigmentation The Toxin from Gymnodinium veneficum: It’s a Karlotoxin Karlotoxin Identification for the Norway Strains Karlotoxin Potency Determination of Goby Kill Units Sterol Dependency of Toxicity Can PLY103 Eat? Toxin Production during Batch Culturing for the Norwegian Strains Genome Size Variation in K. veneficum Strains DNA Base Composition Variation in K. veneficum Strains Cell Cycle Cell Cycle and Toxicity Life Cycle Asexual Reproduction Sexual Reproduction Swimming Behavior Ecology and Toxicity in K. veneficum Global Distribution and Potential Roles of Karlotoxin in Karlodinium veneficum K. veneficum Distribution and Reported Blooms Top Down Forces Regulating K. veneficum Abundance Synthesis: Why Does K. veneficum (Sometimes) Form Ichthyotoxic HABs? Acknowledgments References Chapter 146 Ciguatera-Causing Dinoflagellates in the Genera Gambierdiscus and Fukuyoa: Distribution, Ecophysiology and Toxicology Abstract 1. Introduction 2. Biodiversity of Gambierdiscus and Fukuyoa spp. 3. Global Distribution of Gambierdiscus and Fukuyoa spp. 4. Ecophysiology 4.1. Gambierdiscus/Fukuyoa spp. Preferred Habitats 4.2. In Vitro Growth 5. Toxicology 5.1. Chemodiversity of Secondary Metabolites 5.2. Modes of Action of Bioactive Compounds 5.3. Toxin Production in Gambierdiscus and Fukuyoa spp. 5.3.1. CTXs Production 5.3.2. MTXs Production 5.3.3. Biotic Factors Influencing Toxin Production in Gambierdiscus and Fukuyoa Spp. 5.3.3.1. Genetics of Toxin Production 5.3.3.2. Growth Stage 5.3.3.3. Contribution of Bacterial Flora 5.3.4. Abiotic Factors Influencing Toxin Production in Gambierdiscus and Fukuyoa spp. 5.4. Ecological Relevance of Ciguatera-Related Compounds 6. Socio-Economic Impacts of Ciguatera Poisoning 6.1. Ciguatera Poisoning Impact on Health-Related Expenses 6.2. Ciguatera Poisoning Impact on Local Fisheries 6.3. Ciguatera Poisoning Impact on International Trade 6.4. Ciguatera Poisoning Impact on Tourism 6.5. Ciguatera Poisoning as a Cause of Lifestyle and Tradition Upheaval 6.6. Ciguatera Poisoning before the Law Conclusion References Chapter 147 Diarrhetic Shellfish Poisoning Abstract Introduction Chemistry and Bioactivities Toxin Contents and Profiles in Dinophysis spp. Accumulation and Metabolism of Toxins in Shellfish Instrumental Analytical Methods Liquid Chromatography (LC)/ Mass Spectrometric (MS) Detection Liquid Chromatography (LC)/ Fluorometric (FL) Detection Quantitative Nuclear Magnetic Resonance Spectroscopy (qNMR) References Chapter 148 The Toxic Marine Thecate Dinoflagellate Pyrodinium bahamense Abstract Introduction Taxonomy and Biology Thecal Morphology Varietal Status of Pyrodinium bahamense Reproduction Bioluminescence Saxitoxin Production Sterol Production Ecological Significance Ecological Niches Saxitoxins in the Food Web Bloom Dynamics Bacteria Interaction Conclusion: Knowledge Gaps and Suggestions for Future Research Acknowledgments References Chapter 149 Ecology and Range Expansion of Noctiluca scintillans in the Global Oceans Abstract 1. Introduction 2. Distribution 3. Description 4. Growth and Grazing 5. Remote Sensing of Noctiluca 6. Emergence and Expansion of Noctiluca Blooms 7. Socioeconomic Effects from Blooms of Noctiluca Conclusion Acknowledgments References Chapter 150 Putting It All Together: The Arabian Gulf Dinoflagellates Abstract Introduction Dinoflagellate Distribution Distribution Limitations Xenobiodiversity and Plausible Ballast Water Introductions Harmful Algal Blooms in the Gulf Conclusion Recommendations Acknowledgment References Chapter 151 Dinoflagellates and Global Environmental Change Abstract 1. Introduction 2. Case Studies from the Oslofjord and Skagerrak Fossil Record 3. Case Studies of Possible Anthropogenic Transport of Dinoflagellate Species via Ship’s Ballast Water or Translocation of Shellfish Products 4. Dinoflagellates as Indicators of Ocean Currents and Bioregions 5. Dinoflagellates and Climate Change References Chapter 152 Evolution of Dinoflagellate Genomics and Gene Expression of Toxins Abstract 1. Dinoflagellates 2. Dinoflagellate Genomics 3. Dinoflagellate Toxins 3.1. Paralytic Shellfish Poisoning (PSP) Toxin 3.2. Neurotoxic Shellfish Poisoning (NSP) Toxin 3.3. Diarrhetic Shellfish Poisoning (DSP) Toxin 3.4. Ciguatera Fish Poisoning (CFP) Toxin 3.5. Azaspiracid Poisoning (AZP) Toxin 4. Dinoflagellate Toxin Synthesis 5. Applications for Detection and Quantification of Toxic Dinoflagellate 6. Dinoflagellate Bioactives: Potential Applications Conclusion References Chapter 153 Impacts and Management of Dinoflagellate Harmful Blooms Abstract 1. Introduction 2. Impacts of Harmful Dinoflagellate Blooms 2.1. Direct Impacts on Human Health 2.2. Losses in Shellfish and Finfish Aquaculture 2.3. Societal Losses: Tourism and Culture 2.4. Losses on Desalination Plants 2.5. Impacts on Marine Organisms 3. Prevention, Management and Mitigation 3.1. Prevention: Monitoring and Scientific Research 3.2. Management and Mitigation 4. How to Progress on the Estimation of the Economic Costs of Harmful Dinoflagellate Blooms? Acknowledgments References Chapter 154 Mitigation of the Effects of Harmful Algal Blooms Originated by Dinoflagellates Abstract 1. Introduction 2. Actions on Phytoplankton Populations 2.1. Inoculum Reduction 2.2. Flocculation/Sedimentation of Algae from the Water Column 2.3. Chemical Methods to Kill Algae 2.4. Biological Methods 2.4.1. Predation 2.4.2. Parasitism 3. Actions on the Environment 4. Actions on the Accumulation of Toxic or Noxious Substances in Fish and Shellfish 4.1. Actions on the Accessibility of the Harmful Algae to the Cultured Organisms 4.2. Actions on Toxin Accumulation 4.3. Actions on the Final Product 4.3.1. Selection of Individuals 4.3.2. Selective Evisceration 4.3.3. Industrial Processing 5. Regulation and Monitoring References Chapter 155 U.S. Offshore Aquaculture Regulation and Development( Abstract Introduction Background Seafood Production Aquaculture Overview Offshore Aquaculture Federal Government Involvement in Aquaculture U.S. Department of Agriculture Department of the Interior Department of Commerce Offshore Aquaculture Challenges Current Regulatory Framework Federal Permits to Conduct Aquaculture in the Federal Waters Section 10 Permits National Pollutant Discharge Elimination System Permit Fishing (Aquaculture) Permit Federal Consultation and Review Requirements Coastal Zone Management Act National Environmental Policy Act Endangered Species Act and Marine Mammal Protection Act MSA Essential Fish Habitat National Marine Sanctuary Act National Historic Preservation Act Fish and Wildlife Coordination Act Other Authorizations and Approvals Environmental Concerns Fish Waste Fish Diseases Drugs and Other Chemicals Escapes, Genetic Concerns, and Invasive Species Interactions with Other Species Aquaculture Feeds and Related Issues Feed Production and Use Conversion of Aquaculture Feed to Fish Flesh Substitutes for Fish Meal and Oil Fish Health Human Health and Preferences Sustainability Concerns Economics, International Conditions, and Stakeholder Concerns Factors Related to the Economic Viability of Offshore Aquaculture Demand Supply Private Benefits and Externalities International Factors and Domestic Experiences Trade U.S. Experiences Offshore Development in Other Countries Stakeholder Concerns and Aquaculture Development Institutional Needs and Industry Support Regulatory Framework for Offshore Aquaculture Lead Agency Permits and Leases Conditions of Use Other Management Entities Federal Support for Offshore Aquaculture Potential Issues for Congress Congressional Actions 116th Congress 115th Congress Congressional Actions Prior to the 115th Congress Conclusion Chapter 156 An Approach to Determining Economic Impacts of U.S. Aquaculture( Abstract Executive Summary 1. Introduction 1.1. Purpose and Organization of the Study 2. Integrating Domestic Aquaculture Production Impacts into Fisheries Economics of the U.S. 2.1. Wild Domestic Harvest in Fisheries Economics of the U.S. 2.2. Aquaculture Integration 3. Case Studies 3.1. Crawfish Aquaculture 3.1.1. Crawfish Production Data 3.1.2. Crawfish Economic Impacts 3.2. Oyster Aquaculture 3.2.1. Oyster Production Data 3.2.2. Oyster Economic Impacts 3.3. Clam Aquaculture 3.3.1. Clam Production Data 3.3.2. Clam Economic Impacts 3.4. Salmon Aquaculture 3.4.1. Salmon Production Data 3.4.2. Salmon Economic Impacts 4. Aggregate Summary and Analysis 4.1. Overview 4.2. Demonstration - Using Analysis for Future Impacts 4.2.1. Estimating Increase in First Sales Value 4.2.2. Estimating Total Impact and Jobs of First Sales Value 4.2.3. Including Downstream Impacts Conclusion and Recommendations Acknowledgments References Chapter 157 Saltonstall-Kennedy Act: Background and Issues( Abstract Introduction The Saltonstall-Kennedy Act Current Provisions History of the Saltonstall-Kennedy Act Revenue Use of Funds Operations, Research, and Facilities Account Remaining Funding Saltonstall-Kennedy Grant Program Issues for Congress Congressional Actions Funding Allocation Stopping the Transfer to the Operations, Research, and Facilities Account American Fisheries Advisory Committee Act Appendix. History of Financing under the Saltonstall-Kennedy Act Chapter 158 American Fisheries Advisory Committee Act( Section 1. Short Title Section 2. American Fisheries Advisory Committee Section 3. Expansion of Specified Purposes of Fisheries Research and Development Projects Grants Program to Include Fisheries Research and Development Projects Section 4. Public Availability of Grants Proposals Purpose of the Bill Background and Need for Legislation Committee Action Hearings Section-by-Section Analysis Section 1. Short Title Section 2. American Fisheries Advisory Committee Section 3. Expansion of Specified Purposes of Fisheries Research and Development Projects Grants Program to Include Fisheries Research and Development Projects Section 4. Public Availability of Grants Proposals Committee Oversight Findings and Recommendations Compliance with House Rule XIII and Congressional Budget Act Earmark Statement Unfunded Mandates Reform Act Statement Federal Advisory Committee Act Statement Existing Programs Applicability to Legislative Branch Preemption of State, Local, or Tribal Law Changes in Existing Law Made by the Bill, as Reported Act of August 11, 1939 Supplemental, Minority, Additional, or Dissenting Views Chapter 159 Fishery Disaster Assistance (Updated)( Abstract Introduction Disaster Requirements and Procedures Magnuson-Stevens Fishery Conservation and Management Act MSA Regional Coastal Disaster Assistance Interjurisdictional Fisheries Act Other Potential Sources of Assistance Secretarial Disaster Determinations State Role Fishing Capacity Reduction Programs Selected Fishery Failure Cases West Coast Salmon Ocean Troll Fishery (Sacramento) New England Red Tide Gulf of Mexico Fisheries (Hurricanes Katrina and Rita) California Dungeness and Rock Crab Fishery Potential Issues for Congress Timing of Relief Long-Term Management Approaches Defining Fishery Failures Who Benefits? Aquaculture, Subsistence, and Recreational Fisheries Recent Congressional Actions Fishery Failures: Urgently Needed Disaster Declarations Act Other Bills Introduced in the 116th Congress Recent Disaster Determinations and Appropriations Chapter 160 Mixed-Use Fisheries: South Atlantic and Gulf of Mexico Councils Would Benefit from Documented Processes for Allocation Reviews( Why GAO Did This Study What GAO Recommends What GAO Found Abbreviations Background Fisheries Allocations South Atlantic and Gulf of Mexico Councils Have Established and Revised Allocations to Varying Degrees South Atlantic Council Has Established Allocations for Almost All Mixed-Use Fish Stocks and Revised Most of Those Allocations in 2012 Gulf of Mexico Council Has Established Allocations for Certain Mixed-Use Fish Stocks and Revised Three of Those Allocations in 2008 Various Sources of Information May Be Available to Help NMFS and the Councils Conduct Allocation Reviews Trends in Catch and Landings Stock Assessments Economic Analyses Social Indicators Ecosystem Models South Atlantic and Gulf of Mexico Councils Developed Criteria for Initiating Allocation Reviews, but Not Processes for Conducting or Documenting Them Both Councils Established Criteria for Initiating Allocation Reviews Neither Council Has Developed a Process for How to Conduct or Document Allocation Reviews, Although the Gulf of Mexico Council Began Taking Steps to Develop One Conclusion Recommendations for Executive Action Agency Comments and Our Evaluation Appendix I: Mixed-Use Fisheries Allocations in the South Atlantic and Gulf of Mexico Fishery Management Council Regions Appendix II: Comments from the Department of Commerce Index Blank Page Blank Page